KEGG   Methanothrix harundinacea: Mhar_2349
Entry
Mhar_2349         CDS       T01990                                 
Name
(GenBank) Signal sequence recognition 54 kDa protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mhi  Methanothrix harundinacea
Pathway
mhi02024  Quorum sensing
mhi03060  Protein export
mhi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mhi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Mhar_2349
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Mhar_2349
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Mhar_2349
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mhi02044]
    Mhar_2349
Enzymes [BR:mhi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Mhar_2349
Secretion system [BR:mhi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Mhar_2349
  Eukaryotic Sec-SRP protein
   Mhar_2349
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW MeaB nSTAND3 AAA_22 AAA_33 APS_kinase TrwB_AAD_bind AAA_24 AAA_18 Zeta_toxin MobB KTI12 AAA_16 ResIII 6PF2K AAA_30 SRPRB AAA_31 MMR_HSR1 NACHT AAA AAA_8 AAA_19 ATP_bind_1 AAA_5 Thymidylate_kin PRK UvrD-helicase AAA_28 AAA_15
Other DBs
NCBI-ProteinID: AET65700
UniProt: G7WQR6
LinkDB
Position
complement(2508579..2509919)
AA seq 446 aa
MVLDSLGGSLRGALKKIASASRIDKQVVDEAVREIQRALLQADVNVKLVMNLSNRIRDRA
LSEKPAPGMNPREHVINIVYQELINLVGKSSPVTLEKQTIMLVGLQGSGKTTTAAKLATF
FQRKGLRSAVVCADTFRAGAFDQLKALCEKQGVFFYGEKGNPDAPAVARRGLEASRKYDI
VIVDTAGRHALEKDLIQEMMDIDAVVAADHKLLVMDAALGQQASEQAKAFNKAVGITGVI
ITKLDGTAKGGGAMSAVAETNSSVAFIGVGETPNDLERFEADRFISRLLGMGDIKTLIER
AQETKVEEEVDVEALMRGKFTLKDMCKQMEAINKMGPLKQIMQMLPLGGMGLDLSDQEYQ
VTKDRLEKYRVIMSSMTEAELEDPKIITASRIKRISRGSGTPPELVRELLKSHKAMQKAL
KGMRGMNKMGMKRMMKKFGPMMGGGM
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggttctggacagccttggcgggtcgctgaggggggcgctgaagaagatcgcctccgcc
agcaggatagataagcaggtcgtcgacgaggcggtgagggagatccagcgggccctcctc
caggcggacgtcaacgtcaagctggtgatgaacctctccaaccggatccgggaccgggcc
ctctccgagaagcccgccccggggatgaacccgagggagcacgtcatcaacatcgtctac
caggagctgatcaacctcgtcggcaaaagctctccggtcaccctggagaagcagacgatc
atgctcgtcggccttcagggcagtggtaaaaccaccaccgcggcgaagctcgccaccttc
ttccagaggaaggggctccgctcggcggtcgtctgcgctgacaccttcagggccggcgcc
ttcgaccagctgaaggcgttatgcgagaagcagggggtcttcttctacggcgagaagggg
aaccccgacgcccccgccgtcgccaggcgcggcctggaggcgtcgaggaagtacgacatc
gtgatcgtcgacaccgccggaagacacgccctggagaaggatctcatccaggagatgatg
gatatcgacgccgtcgtcgccgccgaccacaagctcctggtcatggacgcagccctcggc
cagcaggcgagcgagcaggcgaaggccttcaacaaggccgttggaattacaggggtcatc
atcaccaagctcgacgggaccgccaaggggggcggcgccatgtccgccgtcgccgagacc
aactcctcggtcgccttcatcggggtcggcgagacccccaatgacctcgaaaggttcgag
gccgaccggttcatatcccgcctcctggggatgggggacatcaagaccctcatcgagcgg
gcccaggagacgaaggtcgaggaggaggtggacgtcgaggccctgatgcggggcaagttc
accctgaaggacatgtgcaagcagatggaggcgatcaacaagatgggccccctgaagcag
atcatgcagatgctccccctcggcgggatggggctcgacctctccgaccaggagtaccag
gtcaccaaggaccggctcgagaagtaccgggtgatcatgtcctccatgacggaggcggaa
ttggaggaccccaagatcatcaccgcctcccggatcaagcggatctcccggggcagtggt
actccgccggagctggtccgggagctcttaaagtcccacaaggcgatgcagaaggccctc
aaggggatgcgggggatgaacaagatggggatgaagcggatgatgaagaagttcggcccc
atgatgggcggcgggatgtag

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