Methanosarcina horonobensis: MSHOH_0009
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Entry
MSHOH_0009 CDS
T03933
Name
(GenBank) RNA ligase, family
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MSHOH_0009
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Motif
Pfam:
Lig_C
RNA_ligase
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
AKB76492
UniProt:
A0A0E3SA26
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Position
complement(10992..12164)
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AA seq
390 aa
AA seq
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MNKGENGEIDPDFVARLAHYLGFDEGRVQHLFEKNYFARNWGKHDYLFRFDKEISHIERG
TVLYEKGDSFEVIMGFPKIRRAMVLDPTIKKYFSGLEKVAVEEKMNGYNVRVAKVKGEIL
AITRSGYICPYTTERAKEKLDLRFFDDFPELVLYGEMLGPDNPYVPKEIYGIESVEFYIF
DIREKNSGNPLSISRKRKILEEYSFLQVECFGEFPLQTAAEEIAKVVRKLGEKEHEGVVI
KDPEMILAPLKYTSSQSNCSDLRHAFRFYNEAGRDYMLSRIVREGFQTVEWNENEAEFKK
RYMQLGESILNPLRESIRSVKDGKRLYEEARIRVKELKTATEFGNYLKRLGIDAIFEEPQ
PIGNEYLIIIKKVNKSTNDKTQAILEGEFW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggggaaaatggggaaatagatcctgactttgttgcgcggctagctcactac
ctagggtttgacgaagggagggttcaacatcttttcgaaaaaaactactttgccaggaac
tggggaaaacatgactatctgttccgtttcgataaagaaatttctcatatagaaagagga
acagtactttacgaaaaaggggattcttttgaagtaattatgggttttcccaaaattcgg
agagctatggtactggaccccactataaaaaaatatttcagcgggcttgaaaaggtagct
gttgaagaaaaaatgaacgggtataatgtaagagttgcaaaagtaaaaggcgaaatcctg
gcaattacccgcagcggttatatctgcccttacacgactgaaagggcaaaagagaagctt
gacctgaggttttttgatgattttcctgaacttgtgctttatggagaaatgctgggccct
gacaacccttatgtcccaaaagagatctatggcattgaatccgtggagttctatatcttc
gatatccgagaaaaaaacagcggcaaccctctttcaataagcaggaagcgtaaaattctg
gaagaatatagttttttgcaggttgaatgctttggagaatttccccttcagacagccgca
gaagaaattgctaaagtagtccggaaacttggggaaaaagagcacgaaggtgtagtaata
aaagaccctgagatgattcttgcccccctgaaatatacctcatcccagagcaactgttcg
gacctcaggcatgccttcaggttctacaatgaagcaggcagggattacatgctctcaagg
attgttagagagggatttcagacagttgaatggaatgaaaatgaagctgagttcaaaaag
cgctatatgcagcttggagaaagcatcttgaacccactaagagagtcaataaggagtgta
aaggatgggaagagactctatgaagaagccagaatcagagtaaaggaactcaaaaccgcc
acagaatttgggaattatctgaaaaggcttgggattgatgcaatttttgaagagccgcag
ccgataggaaacgagtacctaataattattaaaaaagtgaataagagcaccaatgataaa
actcaggcaatcctagaaggagagttttggtga
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