Mannheimia haemolytica USDA-ARS-USMARC-185: D648_14780
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Entry
D648_14780 CDS
T02522
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mht
Mannheimia haemolytica USDA-ARS-USMARC-185
Pathway
mht03410
Base excision repair
mht03430
Mismatch repair
mht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D648_14780 (recJ)
03430 Mismatch repair
D648_14780 (recJ)
03440 Homologous recombination
D648_14780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mht03400
]
D648_14780 (recJ)
DNA repair and recombination proteins [BR:
mht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D648_14780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D648_14780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D648_14780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AGI35482
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All DBs
Position
1063421..1065142
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AA seq
573 aa
AA seq
DB search
MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNLHRPQQLANIEQAVDLL
LQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYLIPDRFSQGYGLSVAVAEM
VLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLPPESLPNADALVNPNLAFCEF
PSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAELLDLVALGTVADVVPLDQNNRI
LVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAADLGFAIAPRLNAAGRLENMSLGVEL
LICENMELARRLALDLDSLNQTRKEFEQEMKAEALSICANLPSLAQSEQAHGIVLYQADW
HQGVIGILASRIKDQFNRPVIAFAQESEESEYLKGSARSINGVHMRDLLEHIDMRHPDLI
EKFGGHAMAAGLTIHQSKLDLFKQIFDQSINAIIEPEQLQGIIYTDGELNALEFTLANAE
MIRQGGPWGQHFPEPSFEGEFSILQQKLLAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPD
LSIKKARLVYRLDINEFRGEKSLQLKVEYLKYI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaataattaaaaggcgcccattattaacaacggaaatagtctctacaaacccg
ttattaaatcgaatctatcaaagtcgaggcataaagaatacgcaagaactagagcataat
ttaaagaatttgcatagaccacagcaacttgccaatattgagcaagccgttgacttgcta
ttacaagcctttcgtgaaaaaagccggatcattattgtgggtgattttgatgcagatggt
gcaaccagtacatcgcttgcccttattgcgttacgccaattgggtttcgataaggtagat
tatttaattccggatcgtttttctcaggggtacggattgagtgtagcggttgctgaaatg
gtattagcaaaaggggcggatttagtcttaacggtagataatggaatttcttcgactgaa
ggcattgctctgctaaaaagccatcagattcaagttttggttaccgatcatcatttaccg
ccagagagcctacccaatgcagatgcactggtaaaccccaatttagctttttgtgaattt
ccgtctaaatctttagccggggtaggcgtgatcttctatgtaatgatggcattgcgttct
cgtatgagagaacaacatttatttgaaaataaaccagagccaaattttgctgaattactg
gatttagtcgctttaggcacagtggctgatgtagtgccgttagatcaaaataatcggata
ttggtgcatcaagggttacagcgaatccgttcagggcattgccgtttagggataaaagct
ttagcggaggtgggcaagcgagatctttctactttgcaagcagcagatttgggttttgct
atcgcaccacgtttgaatgcagctggtcggttagaaaatatgtctttaggggttgagtta
ctaatttgtgaaaatatggaattagctcgccggcttgcgcttgatcttgattctcttaat
caaacccgaaaagagtttgaacaagaaatgaaagcagaagcactgtcgatttgtgcgaat
ttgccaagtcttgcgcagtctgaacaggcacacggaatagtgttatatcaagcagattgg
caccaaggtgtaattgggatcttagcttctcgcattaaagatcaatttaaccgtcctgtc
attgcttttgcacaagaaagtgaggaaagtgaatatctaaaaggttctgctcgctcgatc
aacggagtacatatgcgagatttactggaacatatcgatatgcgacatccagacttgatt
gaaaaatttggtggacacgcaatggcggctggtttgactatccatcaatcaaaattagat
ttatttaaacagatatttgaccaatctattaatgcaattatcgagcctgagcaattacaa
ggcatcatttataccgatggtgagttaaatgcactagagtttactttagccaatgccgag
atgattaggcaaggtgggccttggggacaacattttccagaacctagttttgaaggggag
tttagcattctccaacaaaaattactcgcaggtaaacatttaaaattaatgttgcaatca
gagaaagggcaactatttgatgcaatttggtttaatgtggatgtaagggcgtttcctgac
ttatcgatcaaaaaggcaagattagtttataggttggatattaatgaatttcgaggagag
aaatctttgcaattaaaagtggagtatcttaaatatatttga
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