KEGG   Methanospirillum hungatei: Mhun_2882
Entry
Mhun_2882         CDS       T00325                                 
Name
(GenBank) DNA ligase I, ATP-dependent (dnl1)
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mhu  Methanospirillum hungatei
Pathway
mhu03030  DNA replication
mhu03410  Base excision repair
mhu03420  Nucleotide excision repair
mhu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mhu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mhun_2882
   03410 Base excision repair
    Mhun_2882
   03420 Nucleotide excision repair
    Mhun_2882
   03430 Mismatch repair
    Mhun_2882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhu03032]
    Mhun_2882
   03400 DNA repair and recombination proteins [BR:mhu03400]
    Mhun_2882
Enzymes [BR:mhu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mhun_2882
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mhun_2882
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mhun_2882
DNA replication proteins [BR:mhu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mhun_2882
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mhun_2882
DNA repair and recombination proteins [BR:mhu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mhun_2882
   NER (nucleotide excision repair)
    Other NER factors
     Mhun_2882
   MMR (mismatch excision repair)
    Other MMR factors
     Mhun_2882
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF2850
Other DBs
NCBI-ProteinID: ABD42574
UniProt: Q2FTH4
LinkDB
Position
3163940..3165583
AA seq 547 aa
MIFLEFAELCSRLEKISGRLETISILAETISSLSDDDLPHFCRLILGKPFPEWSGKKLGV
GPNLLYEAVAYVTGRKREEVIDRLSRVGDAGAAVEELLSQKSQTSFFTVELTLADIMAAL
IEISGMEGGRSQKEKVRVIQRILSSASPLEGHYITAILLEDFRIGVGEGNLRDAIAQAFS
VDPNLVEYANQVRNDMGEVAVLARKGEEALRSVRLVPFHPVRMMLARQGTISGVLKEGDP
VAVEFKYDGARFQFHKQNKTCRMYSRRLEEVTNAMPDVVALLDEALPDDIIVDGEVIAVQ
GGHPMPFQTVLRRFRRKHNVAEAADAITMIPNLFDILYYNQEMLIDLPFRERRNILTQVA
SRYVTPQLVSDDETEIEAYYHTALDAGHEGVMLKLQGSRYTPGVRGKDWVKIKPEADTLD
LVVTGAEWGEGKRAHVFGSFLLSVRDDDRLVPISRVATGFSDEQLIWLFDTLQDDIIRKD
GKMVYFEPRLVFEIGYSEIQKSPNYEGGYALRFPRFIEVREDKDLKEANTAEDVEERYIQ
THSSLNT
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgatatttcttgaatttgcagaattgtgttccaggcttgagaaaatatcaggaagactg
gagaccatctccattctggcagagacgatatcatctctctctgatgatgatcttcctcat
ttctgccgccttattctgggaaaaccctttccggaatggagtgggaaaaagctcggtgtc
ggtccgaatctcctgtatgaagctgttgcctatgttaccggcagaaaacgtgaggaagtc
attgaccgtctgagccgggtcggggatgccggtgctgcggttgaagaactcctctcccag
aaatcacagacatcttttttcaccgttgaactgactcttgctgacattatggctgccctt
atcgagatatccggaatggagggcggacgatcccagaaagaaaaggtccgggttatccag
cgaatactctccagtgcctcacctcttgaggggcattacatcactgcaattctcctcgaa
gattttcggattggggtcggtgaaggaaaccttcgggatgccatcgctcaggccttctca
gtcgacccgaaccttgttgagtatgcgaatcaggtcagaaatgacatgggagaagtcgcg
gtgctggcacgaaagggagaagaagctctccgctcagtccggctggttccgttccatccg
gtcaggatgatgcttgcacggcagggaacaatatcaggtgtcctaaaagaaggagatccg
gttgcggttgagttcaagtatgatggggcgaggtttcagttccacaagcagaacaaaacc
tgcaggatgtactcccgccggcttgaagaggtcaccaatgcgatgcctgatgttgttgca
ctccttgacgaggctcttcctgatgacattattgtggatggagaggttattgcagttcag
ggcggccacccaatgccatttcagaccgttctccggaggtttcgaagaaagcacaatgta
gccgaggcagcggatgctatcacgatgatcccaaacctctttgacatcctctactacaat
caggagatgcttattgatctgccatttcgcgagagacggaatatactgacacaggttgca
tccaggtatgtaacccctcagctcgtatcggatgatgagacagagatagaggcatactac
cacaccgcccttgatgctggtcatgagggagtcatgctgaaattacaggggtcacggtac
acacccggtgtcaggggaaaagactgggtgaagataaaaccggaggccgataccctggac
cttgtggtaaccggtgcagagtggggtgaagggaaacgtgctcatgtttttggatctttt
ttactttcagtcagagatgatgacagactggttcctataagccgggttgccaccgggttt
tcagacgaacaactgatctggttgtttgacaccctgcaggatgatattatcaggaaagat
gggaaaatggtttattttgaacccaggctggtctttgagatcgggtattcggagattcag
aaaagtcccaattacgagggagggtatgctctccggtttccccggtttattgaggtacga
gaagataaagacctgaaagaagcaaatacggcagaagatgtcgaggagagatatatacag
acacacagttctctaaatacatga

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