Mesorhizobium huakuii: MCHK_4698
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Entry
MCHK_4698 CDS
T06432
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mhua
Mesorhizobium huakuii
Pathway
mhua02020
Two-component system
mhua02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MCHK_4698 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MCHK_4698 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhua03021
]
MCHK_4698 (rpoN)
Transcription machinery [BR:
mhua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCHK_4698 (rpoN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
HTH_38
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
AID32497
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Position
1838762..1840288
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AA seq
508 aa
AA seq
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MALAAKLQLRQSQSLVMTPQLMQSIRLLQFTHVELEHFIDEEIERNPLLERAEPQDDAAS
DQMQKIEAEPQAAAEGDWFENEAGWSAEAISEKLDTSLENLFPDDPGTSERLGPDLTAQW
KSASGNGGGASSEGLDAGDMAASAITLRDHVGEQIALAFVDPAARLIAGELADGLDETGY
VRADLEEIAMRLGTDAASVAKVLAVCQTFEPTGLFARDLAECVSLQLAARDRLDPAMKAL
VANLELLARRDFQTLKRICGVDEEDLLDMLAEIRALDPRPGMAFSGGASDAIVADVEVRA
ANDGSWTVELNAETLPRVLVDHIYFAQVSPHAKNQAEKDFLAECLQNANWLTRSLDQRAK
TILKVASEIVRQQDAFLVHGVRQLKPLNLRTVADAIGMHESTVSRVTANKYMLTPRGVFE
LRYFFTASIAASGGGDAHSSEAVRDRIKQMIDEERPVDVLSDDAIVDMLKESGVDIARRT
VAKYREGMNIPSSVQRRREKRALASAGR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggcggcgaaactacagctcagacagtcccagtcgctggtgatgacgccgcag
ctgatgcagtcgattcggctgctgcagttcacccatgtcgagcttgagcacttcatcgac
gaggagatcgagcgcaacccgcttctggagcgcgccgagccgcaggatgacgccgcgagc
gaccagatgcagaagatcgaggccgagccgcaagcggccgccgagggcgactggttcgag
aacgaggctgggtggagcgccgaggcgatctcggaaaaactcgatacgtcgctggagaac
ctgtttcctgacgatcccggcaccagcgagcggctcggacccgacctgacggcgcaatgg
aaatcggcttccggcaatggcggcggcgcttcatccgaggggctcgacgccggcgatatg
gcggcgagcgccatcaccttgcgcgaccatgtcggcgagcagatcgccctcgccttcgtc
gatcccgcggcgcggctgatcgcaggcgaactcgccgatggcctcgacgagaccggctat
gtcagggccgatctcgaggagatcgccatgcgtctgggcaccgatgcagcgagcgtggcc
aaggtgctggcggtgtgccagactttcgaaccgaccggcctgttcgcccgcgaccttgcc
gaatgtgtttcgctacagcttgcggcgcgcgaccgtctcgacccggcgatgaaggccctg
gtcgccaatctcgagcttttggcgcggcgtgatttccagacgttgaagcgaatctgcggc
gtcgacgaggaggatctgctcgacatgctggccgaaatccgggcactcgatccgcgcccg
ggcatggcgttttcgggtggcgccagcgacgccatcgtcgccgatgtcgaggtgcgcgcc
gccaatgacggcagctggaccgtcgaactcaacgccgaaacgctgccgcgcgtgctggtc
gaccatatctatttcgcccaggtgtcgccgcatgcgaagaaccaggcggagaaggatttc
ctggccgaatgcctgcagaacgccaactggctgacgcgcagcctcgaccagcgggcaaag
acgatcctcaaagtggcctcggaaatcgtgcgccagcaggatgcgttcctggtccacggc
gtgcgccagctgaagccgctcaatttgcgcacggtggccgacgccatcggcatgcacgaa
tcgaccgtcagccgcgtcaccgccaacaaatacatgctgaccccgcgcggcgtgttcgaa
ctgcgctatttcttcaccgcctcgatcgccgcgtcgggcggcggcgacgcgcattcctcg
gaagcggtgcgtgaccgcatcaagcagatgatcgacgaggagagacccgtcgatgtcctt
tcggatgacgcgatcgtcgacatgctgaaggaaagcggcgtcgatatcgcccggcgcacg
gtcgccaagtatcgggaaggcatgaatattccgtcttcggtgcagcgccggcgcgagaag
cgggcgctcgccagcgccgggcgttag
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