Mesorhizobium huakuii: MCHK_6198
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Entry
MCHK_6198 CDS
T06432
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mhua
Mesorhizobium huakuii
Pathway
mhua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCHK_6198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhua03400
]
MCHK_6198
Enzymes [BR:
mhua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MCHK_6198
DNA repair and recombination proteins [BR:
mhua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCHK_6198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AID33987
LinkDB
All DBs
Position
392019..393488
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AA seq
489 aa
AA seq
DB search
MPSAELNLARYSVLLESETDFAGWRDAARRLALNEVRPEDISWHVAAGSDRTRNDLPAAP
QGSQLVVPRDFIGQAETAFCHSDPTRFAFLYRMLWRLRSEPKLLSIASDPDTRRLEAMEK
AVRRDSHKMHAFVRFRKIGDGAVERYVAWFEPDHFIVERNADFFVRRFTGMRWTILTPHT
SADWDGERLAIGPGAAKGDAPTEDDTEALWRTYFENIFNPARLKVKAMQKEMPKKYWRNL
PEASLIPELIAGADKAAKEMIARMPTTPAPHHAKVQAKHWPKREPTQTPGGDAASSISEL
REAAKGCRRCPLWRDATQTVFGEGPDNAKVIFVGEQPGDQEDLAGKPFVGPAGKVFDAIL
DEAEVDRQKVYVTNAVKHFKFEPRGKRRIHSKPNAGEVQACRWWIDREFALIKPDLAVAL
GATAALSLLGKAIPVTKMRGQVIEREDGLRVFITIHPSFILRIHEPADKEAERERFLRDM
REVKRLMVA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggccgagctcaaccttgcccgatacagtgtcttgctcgaaagcgagaccgat
tttgccggttggcgcgacgcggcccgtcgcctggcgctgaacgaggtcaggcccgaggat
atcagctggcatgtcgcggccggttcggaccggacgcggaacgatttgccggccgcgccg
caaggctcacaactcgtggtgccgcgcgacttcatcgggcaggcggaaaccgccttctgc
cattccgatcccacccggttcgcctttctctaccggatgctgtggcggctgcgcagcgag
cctaagctgctgtcgatcgcctcggatcccgacaccaggcggcttgaggccatggaaaaa
gcggtgcggcgcgacagccacaagatgcatgccttcgtgcgcttccggaagataggcgat
ggcgccgtggagcgttatgttgcctggttcgagcctgatcatttcatcgttgagcgcaat
gcggatttcttcgtcaggcgcttcacgggcatgcgctggacgatcctgacgccgcacacc
tccgccgattgggatggtgaaaggctggcgatcgggccgggtgcggccaaaggcgatgct
ccgactgaggatgataccgaggcgctgtggcgcacctatttcgagaacatcttcaatcca
gcgcggctgaaggtgaaggccatgcagaaggagatgccgaagaaatattggcggaacctt
cccgaggcctcgctcattccagagctgatcgcaggagcggacaaggccgccaaggagatg
attgccagaatgccgacaacgcccgcaccgcaccacgccaaggtgcaggcaaagcattgg
ccaaagcgtgagccgacacagacgccgggaggtgatgccgccagcagcatttccgagctg
cgcgaggccgcgaaaggctgccgccgctgcccgttatggcgcgatgcgacgcagaccgtg
ttcggcgaagggcctgacaatgccaaggtcatcttcgtcggcgaacagcccggcgatcag
gaggacctcgccggcaaacctttcgtcggtccggccggcaaggtgttcgacgcgatcctc
gacgaggcggaggtggatcgccaaaaagtctacgtcaccaacgcggtcaagcacttcaaa
ttcgagccgcgcggcaagcgccgtatccattccaagccgaatgccggtgaggtgcaggcc
tgccgctggtggatcgacagggaattcgcactgatcaaaccggatcttgccgtggcgctc
ggcgctacggctgccttgtctttgctgggcaaggccataccggtgacaaagatgcgcggc
caagtgatcgaacgagaggatggcctgcgcgtgttcatcaccatccatccctccttcatc
ctgcgcatccatgagcctgccgacaaggaggccgagcgcgagcgtttcctgcgggatatg
agagaggtgaagcggttgatggttgcctga
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