Mycobacterium intracellulare ATCC 13950: OCU_42820
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Entry
OCU_42820 CDS
T02158
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mia
Mycobacterium intracellulare ATCC 13950
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mia03021
]
OCU_42820
Transcription machinery [BR:
mia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCU_42820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
DUF6456
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AFC45501
UniProt:
H8IQU5
LinkDB
All DBs
Position
complement(4513365..4513826)
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AA seq
153 aa
AA seq
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MYSDNVGWVYRTLFARVGNRTDAEDLTAEVFLAALRPLRLTVSVAEVRAYLRATARTVLA
AHWRQTLGREITSIEDIEQPADSEEAISTAPQRVARVLDALPDRYRLILESRFLRGNSIK
ESAAELGISVPNAKVLQHRALRLAAQVNDGGKQ
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
gtgtactccgacaacgtggggtgggtgtaccgcacgctgttcgcgcgcgtcggcaaccgg
accgacgccgaagacctcaccgccgaggtgttcctcgccgcgctgcggccgctgcgcctg
accgtgagcgtggccgaggtgcgcgcctacctgcgggccacggccaggacggtgctggcc
gcacactggcgccagaccctgggacgggagatcacctcgatcgaggacatcgagcaaccg
gccgacagcgaggaggcgatcagcaccgcgccgcagcgggtggcccgcgtcctggacgcc
ctgccggatcggtatcgcctgatcctggaatcgcgctttctgcgcggcaattcgatcaag
gagtcggccgcggaactcggaatcagcgtgcccaatgccaaagtgctccagcaccgcgcc
ctgcggctggcggcgcaggtcaacgatgggggcaagcaatga
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