Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0303
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Entry
UY43_C0001G0303 CDS
T04022
Name
(GenBank) RNA polymerase sigma factor, RNA polymerase primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UY43_C0001G0303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mib03021
]
UY43_C0001G0303
Transcription machinery [BR:
mib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UY43_C0001G0303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r1_1
KORA
Sigma70_r4_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AKM79048
LinkDB
All DBs
Position
258439..260034
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AA seq
531 aa
AA seq
DB search
MMAEMENKPVSQELGAEGGANLTPLESLIEIGREGGLVTFNDVLSFFPDVDEPGDFDRVL
DSLQTAGILVVEEEVESEPTDEDLADNELTRLSSGTDLKHLNSDDIVGTYLREVSRVPLL
TGKEEVNLAKRIEKGRQAREEVAEGDYEAEELGRFREIIDSGDEAFKHLVAANGRLVVSV
AKKYMGRGVPIEDLIQEGNIGLIRAAKKFDYRRGHKFSTYATWWIRQAITRGIADQGRTI
RVPVHMGDSINKMLKVQHQLVQKLGREPTNEEVAAELDKTKTSKAPITASKVKMMKQVAR
RPLSLEQPTGDVEDDSVLGDFVEDKTELPPDETAANNLLNEHLAEVMADLPPREQRVLEL
RYGLADGMAYTLEEVGRKMGVTRERVRQIEAQALSRMRHPMVRKRLREYLSEDTFEYFKK
PSLERARASRENIFKTGSFDSYYLSLSGRKNPMVVSSLDRLGGISLSEINKTLLGFLNFE
RRVLKKALGIELERGFVYSVPGIMKETGLSRYAIEGIISRGLAEIMARYKG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagatggaaaacaaaccggtgagtcaggagttaggcgctgaaggcggtgcc
aacttgacgccgcttgagagcctgatcgagattggcagagaaggcggtctggtgactttt
aatgatgttttaagttttttccccgacgtcgacgaacccggggattttgatcgagtattg
gattctctacagacagcagggatattggtggttgaggaagaagttgagtcggagccaacg
gatgaggatttggccgataacgaactgacccgtctaagtagcgggacagatttaaagcat
cttaattcagatgatatcgtgggaacgtatcttagagaagtgagccgagtgcctttgttg
accggcaaagaggaggttaatttagccaaaaggattgaaaaaggcaggcaggcgagagaa
gaagtggcagagggagattatgaggcggaagagttggggaggtttcgggaaatcatagac
agtggtgatgaggcctttaagcatttagtggctgccaatgggcgtttggtagtcagcgtg
gctaaaaaatacatggggcgcggcgtgcctattgaggatttaatccaagaaggcaacatt
ggcctaatcagggcggctaaaaagttcgactatcgtcggggtcataagtttagcacttac
gccacttggtggattcggcaggctatcactcgggggattgctgatcagggcaggacgatc
agagttccggttcatatgggagatagtattaacaagatgcttaaagtgcagcatcagtta
gtccagaaacttggtcgagaaccaactaatgaagaggtggcggcggagcttgataagact
aagacgagtaaagcaccgattacggctagtaaggtaaaaatgatgaagcaagttgccaga
aggccgttgtctttggagcagccgaccggagatgttgaggatgattcggtgttgggagac
tttgttgaggataagactgaactaccgccagatgaaactgcggcaaacaacttactcaat
gaacatttggcggaggtgatggcagatttgccgccaagagaacagcgggtgttggagtta
aggtacggcttggcggacggaatggcttacactttggaagaggtcggcagaaaaatgggt
gtaactagagagagggtgaggcaaatcgaggctcaggcgttatcgagaatgagacacccg
atggtgagaaagaggttaagagagtatttgtctgaagatacatttgaatattttaagaaa
ccaagtcttgagcgagcgagagcgtcaagagaaaacatatttaagactggcagttttgat
agctactatcttagtctttccgggagaaaaaacccgatggtggtaagcagcttagatcga
ttggggggcataagtttgagcgaaattaataaaactcttctgggatttttaaattttgaa
agaagggtgctgaaaaaagctttgggaatagaattggaaaggggttttgtttattcggtg
ccagggattatgaaagagaccgggttatcgcggtacgcgattgaaggaattatttccagg
ggtttggctgaaataatggcgagatataaagggtag
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