Allocoleopsis franciscana: Mic7113_0900
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Entry
Mic7113_0900 CDS
T02374
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mic
Allocoleopsis franciscana
Pathway
mic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mic7113_0900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mic03019
]
Mic7113_0900
03016 Transfer RNA biogenesis [BR:
mic03016
]
Mic7113_0900
Enzymes [BR:
mic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Mic7113_0900
Messenger RNA biogenesis [BR:
mic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Mic7113_0900
Transfer RNA biogenesis [BR:
mic03016
]
Prokaryotic type
tRNA degradation factors
Mic7113_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
aRib
Motif
Other DBs
NCBI-ProteinID:
AFZ16800
UniProt:
K9W8S1
LinkDB
All DBs
Position
complement(1034676..1036829)
Genome browser
AA seq
717 aa
AA seq
DB search
MVELDKSISFDGRDIRLKVGLLAPQAGGSVLIQSGDTAVLVTATRAQGREGIDFLPLLVD
YEERLYAAGRIPGGFLRREGRPPEKVTLTSRLIDRPLRPLFPSWLRDDIQIVATTLSMDE
QVPPDVLAVTGASIAVLQAKIPFYGPMAAVRVGLVGDDFIINPTYREIESGDLDLIVAGS
PDGVIMVEAGANQLPEQDIIEAIDFGYEAVRDLIEAQRELMASLGIEVTIAEPPVGDTTL
EQFIRDRATTQIKGILSQFDLDKHSRDTALDEIKANSVVAAIAELPEDEPVRVAATEDDK
AVGKIFKDITKQLMRRQIVEEGVRVDGRKLDEVRPVSCKVGLLPQRVHGSALFNRGLTQV
LSTATLGTPGDAQKLDDLNPEEDKRYLHHYNFPPYSVGETKPMRSPGRREIGHGALAERA
IVPVLPPQEDFPYVLRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPLTKPVSGAAMGLIK
EGDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITGLSMDVISEAIKQARPAR
LHILEKMLVALDKPRTELSPFAPRLLTMRIDPDLIGLVIGPGGKTIKGITEQTGAKVDIE
DDGTITVSAVDGEKAKKAINIIQGMTRKLNEGDVYSGRVTRIIPIGAFVELLPGKEGMIH
ISQLADYRVGRVEDEVAVGDEVVVKVREIDSKGRVNLTRLGIHPDEAAAAREAAAMT
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggtagagttagacaagtcaatatccttcgacggacgggatattcgactgaaagtgggt
ctacttgccccacaagccggtggttccgtgctgattcagtcgggcgacacggcagtttta
gtaacagcaacacgcgcccaaggccgagaaggcatagattttcttcccttgttggttgat
tacgaggaacgactctatgcggctggtcggattccaggtggatttctgcgacgggaaggt
cgtccgccagaaaaggtgacgctcaccagccgtctgattgaccgtcccctgcgcccccta
ttccccagttggcttcgagatgatattcaaatcgtagcaactaccctgtccatggatgaa
caggtaccacccgatgttttggcggtaacgggagcttcgatcgcagtattacaagccaag
attccattttatgggccgatggcagccgtgcgagtcggtttagtcggtgatgactttatc
atcaacccaacgtacagagaaattgagtcgggagacttggatttgatcgtcgccggttcc
cccgatggcgtgattatggtagaagccggtgccaaccaactgccagagcaggatattatt
gaggcgatcgactttggctacgaggcggtgcgggacttaattgaagcccagcgcgagttg
atggcatctttaggcattgaggtgaccatcgccgaaccaccggtgggagataccacccta
gagcaatttatccgcgatcgcgcaacgactcaaatcaaaggaattctctcgcaatttgac
ctcgacaaacacagtcgggataccgctttagatgaaatcaaagcgaattcggttgtggca
gccatcgccgaattacccgaagacgaaccggttcgagtcgccgcaacggaagatgataaa
gcagtcggcaagattttcaaagacattaccaaacaactgatgcgccgtcagattgttgaa
gaaggcgttcgggttgatggtcgcaaactcgatgaagtgcgccccgtctcttgtaaggtc
ggtttattgccccagcgagtccatggcagtgctttgtttaaccggggactcactcaagtg
ttatccacggcaaccttgggaaccccaggcgatgctcaaaagctggatgacctcaacccc
gaagaagataagcgctatctgcatcattacaatttcccaccttattcagttggggaaacc
aaaccgatgcgatcgcccggacgccgggaaatcggtcacggtgctttagccgaacgcgcg
atagtccccgtcttacccccccaagaagacttcccttacgtccttcgggtcgtgtcggag
gtactttcttccaatggttcgacctcgatgggttcggtttgtgggtctaccctggcattg
atggatgctggcgtacccctgacgaagccagtgagtggcgcagccatgggtctgattaaa
gaaggggatgaagtccggattctcaccgatattcaaggcattgaagactttttgggtgac
atggatttcaaagtcgccggtactgataccgggatcacggctttgcaaatggacatgaaa
atcactggtttgtcgatggatgtgatttccgaagccattaagcaagcccgaccggcgcga
ctgcatatcctggagaaaatgcttgtagccctagacaaaccccgtacagagttgtcgcct
ttcgcgcctcgcctgctaacgatgaggattgatccagacctgattggtctggtgattgga
cctggcggtaagaccattaaggggattaccgaacaaaccggggccaaggtggatattgaa
gacgacggtacgattaccgtttctgcggtcgatggtgaaaaggccaaaaaggcaattaac
atcattcaaggcatgacccggaagctgaatgaaggggatgtctattctggtcgcgtcact
cggattattcccattggtgcttttgtagaattgctgcctgggaaagaaggcatgatccac
atttctcaactcgcggactatcgcgtcggtcgagtagaggatgaggtcgcggtcggggat
gaagttgtggttaaagttcgagaaattgacagtaaagggcgcgtcaatctcactcgttta
ggcattcacccagacgaagccgcagcagcgcgggaagcggcagcgatgacctag
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