Micromonospora sp. L5: ML5_3003
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Entry
ML5_3003 CDS
T01379
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mil
Micromonospora sp. L5
Pathway
mil03420
Nucleotide excision repair
mil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ML5_3003
03430 Mismatch repair
ML5_3003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mil03400
]
ML5_3003
Enzymes [BR:
mil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ML5_3003
DNA repair and recombination proteins [BR:
mil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ML5_3003
MMR (mismatch excision repair)
Other MMR factors
ML5_3003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADU08520
LinkDB
All DBs
Position
3150298..3152421
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AA seq
707 aa
AA seq
DB search
MGVHSAAERVLAGLDPEQRSAVTAPAGPVCILAGAGTGKTRAVTSRIAYRALTGDIAGRH
VLAVTFTARAAAEMRSRLTVLGVQGVQARTFHAAALRQVRYFAPRLLAGRAMPELLDSKV
RVVTLAAAKVGLRADRAAARDLSAEIEWAKSSLVEPGEYVVAAAKALRETPYEPARVADV
FDAYERLKRGNGVIDFEDMLRAAVWGIEEHPDVAEQVRNQYRHFVVDEYQDVNPLQQRLL
EAWLGGRDDLTVVGDASQTIYSFTGATSSYLVDFPRLHRGATVVRLVRDYRSTPQVVGLA
NAVISQARGTEARLRLELHGQRRPGPEPELRIFTDEPAEANAVAARCRALVAGGTPAREI
AVLFRTNAQSEAYEKALSEAGVPYVLQGAERFFERPEVRQAMIALRAATRSADAGTPLPA
AVVEALTAVGWAPDAPPPGGAARERWEALAALVQLAEEYAAQAEEEPGLTGFTEELARRA
AQQHVPTVEGLTLASLHSAKGLEWDAVFLVGLAEGTLPTTYAKTMEQVEEERRLLYVGIT
RAREWLWLSYATARSPGGRARRPSRFLPQLDRSGGGERAGGGGPARRAERRRPQVVSCRI
CGATLLAGADRKLGRCPTCPSDIDEELYERLREWRQRVAGAQKVPAYVVFTDATLTALAE
RKPGRTEELVAIAGIGPRKVGLYGDTVLALVAGATVDEVCPQKTSEN
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgttcactcagcggcggaacgggtgctggccgggctggatccggagcagcggtcc
gcggtgaccgctccggccggtccggtctgcatcctggccggcgccggcaccggcaagacc
cgggcggtgacctcgcgaatcgcgtaccgggcgctgaccggcgacatcgccggccggcat
gtgctggcggtcacgttcaccgcccgcgccgccgccgagatgcgcagccgtctcacagtg
ctcggggtgcagggtgtgcaggcgcgcacgttccacgccgcggcgctgcggcaggtccgc
tacttcgcgccccggctgctggccgggcgggccatgccggagctgctggacagcaaggtg
cgggtggtcacgctcgccgccgccaaggtcggcctgcgcgccgaccgggccgccgcgcgg
gacctgtccgccgagatcgagtgggccaagtcgtcgctggtcgagcccggggagtacgtc
gtcgccgcggccaaggcgctgcgcgagacgccgtacgagccggcccgggtggccgacgtg
ttcgacgcgtacgagcggctcaagcgcggcaacggggtgatcgacttcgaggacatgctg
cgcgccgcggtctggggcatcgaggagcacccggacgtggccgagcaggtgcgcaaccag
taccggcacttcgtggtcgacgagtaccaggacgtcaacccgctccagcagcggctgctg
gaggcgtggctgggcggccgggacgacctcacggtggtcggcgacgccagccagacgatc
tactcgttcaccggcgccacctcgtcgtacctggtcgacttcccccgcctgcaccgcggc
gcgacagtcgtccggctggtccgcgactaccgctccacaccgcaggtggtcgggctcgcc
aacgcggtgatctcgcaggcccggggcaccgaggcgcggctacggctggagctgcacggc
cagcgccggcccggcccggaaccggaactgcggattttcaccgacgagccggccgaggcg
aacgcggtcgcggcccgctgccgggcgctcgtggcgggcggcaccccggcgcgggagatc
gcggtgctgttccgcaccaacgcgcagtccgaggcgtacgagaaggcgctctccgaggcc
ggggtgccgtacgtgctccagggtgcggagcggttcttcgagcggcccgaggtgcgccag
gcgatgatcgcgttgcgcgccgccacccggtcggccgacgcgggaaccccgctgccggcc
gccgtggtcgaggcgctcaccgccgtcggctgggcgcccgacgcgcccccgcccggcggc
gccgcgcgggagcggtgggaggcgctcgccgcgctggtccagctcgccgaggagtacgcg
gcgcaggccgaggaggaaccgggcctgaccgggttcaccgaggaactcgcccggcgggcc
gcccagcagcacgtgcccacagtcgaggggctgacgctcgcgtcgctgcactcggcgaaa
gggctggagtgggacgcggtgttcctggtcgggctggccgagggaacgctgcccaccacg
tacgcgaagaccatggagcaggtcgaggaggaacggcggctgctctacgtcgggatcacc
cgggcccgggagtggctctggctgtcgtacgccaccgcgcgctcgccgggtgggcgggcc
cggcggccctcgcggttcctgccgcagctcgaccggtccggcggcggggagcgggccggc
ggcggcgggccggcgcggcgggccgagcggcgccggccgcaggtggtctcgtgccggatc
tgcggcgccacgctgctcgccggcgcggaccgcaaactgggccgctgcccgacctgcccg
tcggacatcgacgaggagctgtacgagcggctgcgcgagtggcggcagcgggtggcgggc
gcgcagaaggtgccggcgtacgtggtcttcaccgacgccacgctcaccgcgctggccgag
cggaagcccggccgcaccgaggaactggtggcgatcgccgggatcgggccccgaaaagtc
gggctttacggggatacggtgctcgccctggtggcgggcgccacggtggacgaggtctgc
ccacagaaaacttctgaaaactag
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