Mangifera indica (mango): 123208852
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Entry
123208852 CDS
T07684
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
minc
Mangifera indica (mango)
Pathway
minc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123208852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123208852
Membrane trafficking [BR:
minc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123208852
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
DUF1912
Motif
Other DBs
NCBI-GeneID:
123208852
NCBI-ProteinID:
XP_044482383
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All DBs
Position
2:19364090..19373816
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AA seq
947 aa
AA seq
DB search
MAPIPSENGVEGDDEREEEEEEEDEEEEEEPRLKYQRMGGSIPSLIPNDAASCIAIAERM
IALGTHAGTVHILDFLGNQVKEFSAHSAVVNDLSFDIEGEYIGSCSDDGSVVINSLFTDE
KMKFEYHRPMKAISLDPDYARKTSRRFVGGGLAGHLYFNSKKWLGYRDQVLHSGEGPIHA
VKWRTSLIAWANDAGVKVYDVANDQRITFIERPRRSPHPDILLPHLVWQDDSLLVIGWGT
SIKIASIRTNQNKGANGTYRHAPMSRMNQVDIVASFQTSYYISGIAPFGDSLVVLAYIHG
EEEGEKEFSSPIPSRQGNAQRPEVRIVTWNNDELATDALPVHGFEHYKAKDYSLAHAPFS
GSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLQHGWHEKALAAVEAGQGRS
ELLDEVGSTYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPT
ENPRLRDTAYEVALVALATNPSFHKDLLSTVKTWPTVVYSALPVISAIEPQLNTSSMTDE
LKEALTELYVINGQYEQAFSLKADLMKPDIFDFIEKHNLQDALREKVVQLVLLDCKRAVP
LLIQNKNVIAPSEVIAQLLDAINMCDSRYFLYLYLHSLFEVNPHAGKDFHDMQVELYADY
DPKMLLPFLRSSQHYTLEKAYDICVRRDLLREQVFILGRMGNSKQALAVIINKLGDIEEA
VEFVNMQHDDELWEELIKQCLHKPEMVGMLLEHTVGNLDPLYIVTMVPNGLEIPRLRDCL
VKIVTDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAIYLTNEEDDAWSKRDASRASQ
AIGKTSSVRTMEVKSKTRGGARCCMCFDPFSIQNVSVIVFFCCHAYHMDCLMDSMHTVSA
KRDTGATHREPFSEYEFDNGVEDEDDDEDTQSGPPRMRCILCTTAAS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggctccgattccgtcggagaacggcgtcgaaggcgacgacgagagagaagaagaagag
gaggaggaagatgaagaagaagaggaagagccgaggctcaagtatcagaggatgggaggt
agcatcccttcgcttataccaaacgatgctgcttcgtgtattgctattgctgagcggatg
atcgcgctgggtactcatgctggcacggttcatattctcgatttcttggggaatcaggtt
aaagaattttctgctcatagtgccgtggtcaatgatcttagctttgatatagaaggtgaa
tatataggaagttgttcagatgatgggtctgttgtcataaacagccttttcactgatgaa
aaaatgaagttcgagtatcatcgtccaatgaaggctatttcattggacccagattatgcg
agaaaaacatctagaagatttgtaggtgggggtttggcaggccatttatattttaattca
aaaaaatggctaggctaccgggaccaggttctgcattctggtgaaggcccaatacatgca
gtgaagtggagaacaagcctcattgcttgggctaatgatgcaggcgtaaaagtttatgat
gttgctaatgatcagcgtatcacatttattgaaaggccacgaagaagcccacatcctgac
atcttgcttcctcatttagtttggcaggatgatagtctcttggtcattggctggggcaca
tccatcaaaattgcatcgataagaacaaatcagaataagggagccaatgggacctatagg
catgctccaatgtctagaatgaaccaggttgatatagtggcatcgtttcaaacaagctat
tatatttcaggaattgctccatttggtgattcattggttgttttagcttatattcatggg
gaggaagagggagagaaggaatttagtagccccattccttcacggcaggggaatgcacag
agaccagaagtacgcatagtaacatggaataatgatgaacttgcaacagatgctcttcca
gtacatggctttgagcattacaaggcaaaagactattcccttgctcatgctcctttctca
ggtagcagttatgctggtggtcagtgggctgctggtgatgaacctttgtactacattgta
tccccaaaggatgtagtcattgcaaaacccagggatgctgaagatcatattgcttggctt
cttcagcatgggtggcatgaaaaagctttagctgcagttgaagcgggtcagggacgaagt
gaactccttgatgaggtgggatctacctatcttgatcatttgattgtggagcggaaatat
gctgaagctgcatccttgtgtcccaaattattgcgtggatctgcttcagcttgggaaaga
tgggtcttccattttgcgcatctccgccagctccctgtgttggttccatacatgcctaca
gaaaatccaagattgcgtgataccgcttatgaggttgcccttgtagctctggcaacaaat
ccatcttttcataaggatcttttgtcaactgttaaaacttggccaactgtggtttactca
gcactgcctgttatatctgccatagaacctcagctaaatacttcatccatgactgatgaa
ctcaaagaggcattgacagagttgtatgtgattaatgggcaatatgaacaagctttttca
ctcaaagctgatcttatgaagccagacatttttgacttcattgaaaagcataacttacaa
gatgccctccgtgaaaaggttgtgcaattggtgctgttagattgcaagcgtgctgttcca
ttattgatccagaacaagaatgtgattgctccatctgaagttattgcacagcttttggat
gccatcaacatgtgtgattcaagatatttcttgtatttatatttgcattcattgtttgaa
gtaaatccacatgcaggaaaggattttcatgatatgcaggtagaactttatgcagattat
gatccaaagatgctactcccctttctccgtagtagtcaacattacacactcgagaaggca
tatgatatttgtgtcagaagagatcttttaagggaacaagttttcattcttggaagaatg
gggaattcaaaacaggctcttgctgtcatcattaataaattaggggacatagaagaggct
gtagaatttgtaaacatgcagcatgatgatgaactttgggaagaactgattaagcaatgc
cttcataaacctgaaatggttggtatgttgttagaacacacagttggcaatcttgatcct
ctctatatagtaactatggtccctaatggtttggagatacctcggctaagggattgtcta
gttaaaattgtcactgattacaggaccgaaacatctcttagacatgggtgcaatgacatt
ctgaaggctgatattgtaaatctcttagttaaatactacaaagaggcaagacgcgcaatc
tatttgactaatgaagaagatgatgcatggtccaaaagagatgccagtagggcttctcag
gctattggaaaaacatcaagtgttcgaaccatggaggtcaagtcaaaaactaggggtggt
gctagatgctgcatgtgttttgatccattctctattcagaatgtttctgtcattgtgttc
ttttgttgtcatgcttaccacatggactgtctcatggattccatgcatactgttagtgcc
aagagagatacaggagccactcaccgagaaccattttcagaatatgagtttgataatggt
gttgaggatgaggatgatgatgaggatacccaatcggggcctcctcgtatgcgctgtatt
ttgtgtacaactgctgctagttga
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