Mangifera indica (mango): 123229922
Help
Entry
123229922 CDS
T07684
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
minc
Mangifera indica (mango)
Pathway
minc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123229922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123229922
03036 Chromosome and associated proteins [BR:
minc03036
]
123229922
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123229922
Coactivators
SAGA/TFTC/STAGA complex
123229922
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123229922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
DUF4513
Motif
Other DBs
NCBI-GeneID:
123229922
NCBI-ProteinID:
XP_044511901
LinkDB
All DBs
Position
11:complement(3425019..3432685)
Genome browser
AA seq
956 aa
AA seq
DB search
MDPSIMKLLEEDEDESMHSGAEVDAFQAALNRDIGGDASTSRPSDSDSVTAALSQGKESN
HASVQPIVQWQNVSQDDNKQFQYQQGLESVQQQERPSSEVELKQLGSITENQQPQKDNSV
SEECDHLLLQQKQSQNDSPQAPAEQTPTQVPQAISMQISEKNPIPAHEPEKTHNQDGESQ
FSKIQKMGNQQAVATEQVVNPMNRGKQVPFGLLLPTLLPHLDKDRAMQLHTLYSKLKKNE
IPKDVFVRLMRDIVGDQMLRLAVSKMQSQMDSSQFQASARQQQLKMPSPSAGATQFSDSH
SFSQLHHKGSNSTADPAHIPDSSVQMQVSSTYAIKENNAQKPRELERLPGSHGIHASQMA
SSSPSTVNQERERSAVLVQGLNKQQQQHLHFPQTSYPMYGSSGANYHPYSATNVNPPGSS
LKPHPHDSQMRQISHHQNMGSASSGGASQAMNTMNLPKFERQNSVNELSKVQGGSISHFT
NSSTSQQNIVPWQPSPNKEHNPSSLSSMAYVKPEPVDQVIDQQHKSLPSTPQGLSVAPVE
QGNAIPGTMKDEDFEKQSPRIGFSTSTSRLPSNSVSPSTTTQQDSNVPLSSRMPSVTSSA
GINARTPPKKPSIGQKKPLEAPCSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVNLRE
EEEQLFSGPKEESRVSEASRKVVQEEEERLILQKNPLQKKLAEIMAKCGLKNISNDVERC
LSLCVEERMRGLLCNMIRLSKQRVDPEKTRHRTIITSDIRQQIMIMNRQAREEWDKKQAE
AEKLRKLNEPEGDGAVGGDKEKDEVRSKSVKANKEEDDKMRTTAANVAARAAVGGDDMLS
KWQLMAEQARQKREGGMDVASGSQGGKDVSRRSLSTSGRNSKDNQETENRGPGAPFAGTA
RKLGRNQGVVPQTGVARTISVKDVIAVLEREPQMSKSSLIYRLYEKIKPGSDAATE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggacccctccataatgaagctcctcgaagaagatgaggacgagtctatgcattcgggg
gcagaggtggacgcgttccaggctgcattaaatcgagatataggaggcgatgcgtcgacc
tctcggccgtctgattcagattctgttacagcagctttgtctcaaggaaaagaaagcaat
catgcctctgttcagccaattgtgcagtggcaaaatgtgagccaagatgataataagcag
ttccagtatcaacagggtctagaaagtgtacagcagcaagagcggccttcatcagaggtg
gagctaaagcaacttggatctattaccgagaatcagcagccacagaaagacaactctgtc
tcagaggaatgcgaccatcttcttctacagcagaaacaatcccaaaatgattctccacaa
gcaccggcagaacaaactcccactcaggttcctcaagcaatttcaatgcagatttctgaa
aaaaatcctatccctgctcatgaacctgagaaaacacacaatcaagatggtgaatctcaa
ttttcaaaaatacagaagatgggcaatcaacaggcagtggccacagagcaggtggttaac
cctatgaatcgtggcaaacaagtaccatttggtttgttgcttcctaccttactaccgcat
cttgataaagacagagccatgcagcttcatactctttacagtaaacttaagaaaaatgaa
attcctaaagatgtttttgtccgacttatgagggatattgttggggaccagatgcttaga
ttggcagtaagtaagatgcaatcacagatggattccagtcagttccaagcttctgcacgc
caacaacagttaaagatgccatctcctagtgctggtgccacacaattctctgattcccat
tcattttcacaacttcatcataagggttccaactctactgcagacccagctcacattcca
gactcatcagttcaaatgcaggttagttcaacttatgcgatcaaagaaaacaatgctcaa
aaacctagagagctggaacgtctgcctggttctcatggaatacatgcaagccaaatggct
tcctccagtccgagcactgtcaatcaagagagggaacgctccgctgttcttgtacaagga
cttaacaagcagcaacagcaacatttacactttccacaaacttcctatcccatgtatgga
agtagtggtgcaaattatcacccatattctgcaacaaatgtcaatcctcctggatcatct
ctgaagccacatcctcatgactcacaaatgaggcagattagtcatcatcagaacatggga
tcagcttcatcaggaggggcaagccaagccatgaatacaatgaatttgcctaagtttgag
aggcaaaactctgttaatgagctgagtaaagtgcagggtggttctatctctcactttaca
aacagttcaacatcgcaacagaatatagttccttggcaaccatcaccaaataaagagcat
aatccgagctctttgtcatcaatggcatatgtaaagccagaaccagttgatcaggttatt
gatcagcagcacaaatcccttccatctaccccacaagggctgtctgttgcacctgttgaa
cagggaaatgcaattccaggaacaatgaaggatgaggattttgaaaagcaatctcccaga
attggtttctcaacatctacaagcaggctgccctcaaattcagtgtctccttccacaaca
acacagcaggattcaaatgtgccgttgagttctcggatgccttctgtgacatcttcagct
ggaattaatgcaaggacacctccaaaaaagccttctattggccaaaaaaaacctcttgaa
gcaccctgttcctctccacctttgccaagtaagaagcaaaaggtatctggggcctttttg
gatcaaagcattgaacaactcaatgatgttactgccgtcagtggagttaatctcagagag
gaggaagaacaattattttctgggcccaaggaggaaagtcgagtttctgaagcgtcccga
aaggttgtgcaggaagaagaagaaaggctgattttgcagaaaaatcccttgcagaagaaa
ttggctgagatcatggccaaatgcggcttgaagaatataagtaatgatgtggaacgatgc
ttgtctttgtgtgttgaggaaagaatgcgtggactcttatgtaacatgatcagattgtca
aaacagcgggttgatcctgagaaaactagacaccgtactattatcacctcagatattcga
caacaaattatgataatgaaccgccaagctagggaagaatgggataagaagcaagctgaa
gcagaaaagcttcggaaactaaatgaacctgagggtgatggtgcggttggtggcgataag
gaaaaggatgaagttcgttcaaaatcagttaaggcaaacaaggaagaggatgacaaaatg
agaaccacagctgcaaatgttgctgctcgtgctgctgttgggggagatgatatgctgtca
aaatggcaacttatggctgagcaggctcgccagaaacgtgaggggggtatggatgtggca
tctggttctcagggtggaaaagatgtcagtcgcagatctctatcaacatctggaaggaat
tcaaaggataatcaagaaacagaaaacagaggccctggagctccatttgctggtactgct
agaaagttgggaaggaaccaaggtgtggtgcctcaaactggggttgcccgaactatctct
gttaaagatgtgattgcagttttggaaagagaaccccagatgtccaagtcgagtctgatt
tatcggttgtatgagaaaatcaaaccgggttctgatgctgcaactgaatga
DBGET
integrated database retrieval system
