Macadamia integrifolia (macadamia nut): 122078630
Help
Entry
122078630 CDS
T07436
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
ming
Macadamia integrifolia (macadamia nut)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Med14
Motif
Other DBs
NCBI-GeneID:
122078630
NCBI-ProteinID:
XP_042500636
LinkDB
All DBs
Position
5:1932778..1963562
Genome browser
AA seq
1438 aa
AA seq
DB search
MATKTLTVNSSDHFLDSYRAFSQHSPQTSHPSSLTLLSQGSSLPPVPADFPQSKLIPRTR
FIVDGFRHSGDYSVSYFLSHFHSDHYTGLNSSWSKGIIFCSETTARLLVESLKVPDSFVF
SLSLRETVLIDGCGVTLIDANHCPGAVQFLFQIPVLQGKDERYVHTGDFRFSNSMKQEPL
LSGYAGADAIFLDTTYCNPKFVFPSQEDSVNYIVRAIERIRHENEGLVKSVLFLIATYVI
GKEKILVEIARRCNSLIHVDSRKMAVLCILGFGESGIFTEDDSVTDVHVVGWNVLGETWP
YFRPNFAKMKEIMTEKGYLKAVGFVPTGWMYEAKRDGFAVRTKDSFEIHLVPYSEHSSYD
ELREYVRFLRPKHIVPTVGLDIQNLDSKHVIAMRKHFAGLVDETANKQEFLMSFHRRSRT
RDEDHESDININPERGLDIDDEVKSKGKLLEGLDNTDSRFGLDSASSLQEPGSRDLNVLS
DKDTEEMIQELRDCLPVWITREQMLALLGGSGGNIVDAVSEFYEHETEFRAQVLACGDSA
VMQASLASNSTALPELESNWVAALGSNKSTLSSTRSDSKVFFKLEPNKETPRGGKVSNSV
QEKKSPNMKHSIKSTISPKKRAKGTSNKLNKKAKISSAMDSSSSRSKDSKQTTITKFFRK
IGTDASQVARICNAVAEQRPTSSSLLPIDAIESYKEEVDQFLQLINGSVSRSNAASLLEK
ANGDINVALDIYYRGSSRDLRADIQSVQTQSCVSTHSAGKESESPEETKNTPSLFMQGLS
TGDMTASSVSLPLEKYFPVEHACWSSGQAAPYLHLARTFDLVEGERGKIKAIGILCNMFR
SLLALSPEDVLPAIYLCTNKIAADYEKMELNIGGSLVTAALEEACGTNRSKIKEMYNKMG
DLGDVAQVCRQTQSFLAPPCPLSIRDVFSSLQKISAEIGSGSTTRKKMLIVNLMHSCREK
EIKFLVRTLVRNLRIGAMMKSVLPALAQAVVMNSNNALHEGALENLKPKLQSISAAVVEA
FNILPNLDLLVPSLMNKGVEFSSTTLSMVPGIPIRPMLARITNGVPQVLKMFQGRAFTCE
YKYDGQRAQIHRLTDGSVRVFSRNGDETTSRFPDLVNIIKESCKPDAVTFILDAEVVAVD
RRNGCKLMSFQELSSRERGSKDSLVMVDSIKVDVCVFVFDIMFANGEQLLVVPLRQRRRY
LKDLFLEQKLGYFEYAKEIIVEAEDACVSSQTSLTRINSFLKDAISSSCEGIMVKCLDVE
AGYAASKRSDTWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEF
QSICRVMSGFSDSFYVEMKEFFSGDKVLSKKPPYYQTAEVPDIWFSPELVWEIRGADFTI
SPVHQAAIGLVHPSRGISIRFPRFICSVLDRRVDECSTAEDIADMFHSQTRKMEVGVA
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaaaccctaaccgtgaattcttccgaccacttcctcgattcttacagagct
ttctcacagcattctcctcaaacctcccatccttcgtccttgaccctactctctcaagga
tcttctctccctcccgttcctgcggatttccctcagtccaagctaattccaagaacacgc
ttcatcgtcgacggcttccgtcattccggtgattactctgtttcttacttcctctcgcac
ttccattctgatcactacaccggcttaaattccagttggtcaaaaggcatcatcttctgc
tcggaaaccacagctcgacttttagttgaatcgttgaaagtacctgattctttcgtcttc
tcgttatcgctccgtgaaacagttcttatcgatgggtgtggagtgacactcatcgatgct
aatcactgccctggtgcggttcagttcttgttccagataccggtactgcagggcaaagac
gagaggtatgtacatactggagatttccgattctctaattcgatgaagcaagaacctttg
cttagtggatacgcgggcgcggatgcgattttcttggatactacatattgcaatcccaag
tttgtttttccctcacaagaagattcggttaactatatagtcagggcaatcgaaagaatt
agacacgaaaatgaaggcctcgtgaagtctgtgttgtttcttatagctacttatgttatt
gggaaagagaagattcttgttgagatcgcacgtagatgcaactccttgatacatgtggac
agtaggaaaatggcagttctgtgcattttagggttcggcgagtctgggatttttacggag
gatgattcggttactgacgttcatgtggttggctggaatgtcttgggtgagacttggcct
tattttcgacccaattttgctaaaatgaaggagattatgactgagaagggatacttgaag
gctgttggatttgtcccgacagggtggatgtatgaagcaaaacgagatgggtttgcagtt
aggactaaggattcctttgaaatccatttggtgccttacagtgaacattctagttacgat
gaattgagagagtacgtgaggtttttgagaccaaagcatattgttccaacagtaggtttg
gatattcagaatcttgatagcaaacatgttattgcaatgcggaaacattttgctggattg
gttgatgaaactgcaaataaacaagaattcttgatgagtttccaccgaaggtcccggacc
agggacgaagaccatgaaagtgacatcaacatcaatcctgaaaggggactagacattgat
gatgaggtcaagtcaaaaggaaaacttttggaaggactcgataacactgattctaggttt
ggcttggattcagcatcttctctgcaagagcctggttcgcgagatctaaatgtgctaagt
gataaagatacggaggagatgattcaagagcttcgtgattgtttgcctgtctggattacc
cgagagcagatgttagcactgcttggtggctccggtggtaacattgtagatgcagtttct
gagttttatgaacatgaaacagaattccgtgcacaggtacttgcttgtggcgactctgct
gttatgcaggcaagcttagcaagtaattctacagcacttcctgaattagaatctaactgg
gtcgctgctcttggaagtaacaagagcactctaagctcaacaagaagtgattctaaagta
tttttcaaacttgaaccaaataaggaaacccctcgtggaggtaaagtgagcaattcagtt
caagaaaagaagtcaccaaacatgaagcattcaattaagagtaccatctctccgaagaaa
agggctaagggcacttcgaacaagctaaacaaaaaggcaaagatcagctcagcaatggac
tcttctagctcaaggtcgaaagactcgaaacaaacaacgattacaaagtttttccgtaaa
attgggactgatgcttcacaagttgctaggatttgtaatgccgtggctgaacagcgcccc
actagctcaagcttgttgccaattgatgctattgaatcatacaaagaagaggtagatcaa
tttcttcagctgataaatggcagtgtgtcaagaagcaatgctgcttctctcctggagaag
gctaatggagatattaatgtggcattggatatatattaccgtggttctagtcgtgacctt
cgagctgatattcagtcagttcaaactcaaagctgtgttagtactcattctgctggtaaa
gaatctgaatcacctgaggaaactaaaaatactcctagcttgttcatgcaggggctttca
actggggacatgactgcatcttcagtgtctctacctttagaaaaatatttccccgttgag
cacgcatgctggagtagtggacaggctgcaccatatttacatcttgcacggactttcgat
ttggttgaaggggaaagaggcaagataaaagccattggtattctgtgcaacatgttcaga
agcttgcttgccttatcaccagaagatgtgcttcctgccatttatctgtgcacaaataag
attgctgctgactatgaaaaaatggaactaaacattggtggcagtttggtgacagctgca
cttgaagaggcatgtggaacaaacagatccaaaataaaggaaatgtacaataaaatgggt
gatctaggtgatgttgcgcaagtatgtcggcagactcaatcatttcttgctcctccttgc
ccactttcaatcagagatgtattttcttctcttcaaaaaattagtgcagaaataggcagt
ggaagtaccactcgaaagaagatgcttattgtgaatctcatgcattcttgtcgggagaag
gaaattaagttccttgttcgcactttggttcgtaatttgcgtattggggccatgatgaaa
agtgtacttccggcattggcacaagctgtcgtcatgaactccaataatgctcttcatgaa
ggtgcactggaaaaccttaagccaaagcttcagagcatttctgcagcagtagttgaggcc
tttaatattctcccaaatttggatttgcttgttccttctcttatgaacaaaggcgttgag
ttttcttcaactacgttgtcaatggttcctggcatacctataaggcctatgcttgcaagg
attactaatggagttcctcaagtgctaaagatgttccaaggtagagcttttacatgtgag
tacaagtatgatggtcagcgtgctcaaattcaccgactaactgatggatctgtacgggtc
ttttcacgaaatggtgatgaaacaacatcaagatttccagatttggtaaatataataaag
gaatcatgtaagccagatgctgtgactttcatattggatgcggaggtagttgctgttgat
aggagaaatggatgcaagcttatgtccttccaagaactatcttcacgagagagagggagc
aaagattctttggtcatggtggacagtataaaggttgacgtttgtgtttttgtctttgat
atcatgtttgctaatggagagcagttgttggtcgtccccctacgtcaaaggcggagatat
ttgaaggatttgtttctagaacagaagttgggttattttgaatatgcaaaggagataata
gtggaagcagaagatgcatgtgtgtcctctcaaacctctttgactaggataaactctttt
ctgaaagatgcaatcagttcatcatgtgaaggaataatggtgaaatgtctagatgttgaa
gccgggtatgctgcatcaaagcgttcagatacatggttaaaggtcaagcgagattatgtg
gaaggactgaatgattctcttgatttagttcctattggagcttggcatgggaatggaaga
aaagcaggatggtatagtccattccttatggcgtgttataaccctgagaccgaagagttt
caaagcatctgccgggtcatgtctggattctctgattctttctatgtggagatgaaagag
ttcttctctggtgacaaggtcttatccaaaaagccaccttattatcaaactgcagaggtg
cctgatatatggttttctccagaacttgtttgggaaataagaggtgcagacttcacaatt
tcgccagttcaccaagctgcaattggtttagtccatccatctcggggtatctctatcaga
ttcccaagatttatctgctctgtattggatagaagagtagatgagtgtagtacagctgaa
gatatagctgatatgttccactcccagaccagaaagatggaggtgggagttgcctaa
DBGET
integrated database retrieval system
