Macadamia integrifolia (macadamia nut): 122083906
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Entry
122083906 CDS
T07436
Name
(RefSeq) histone deacetylase 19 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03082
ATP-dependent chromatin remodeling
ming03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122083906
03083 Polycomb repressive complex
122083906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ming03036
]
122083906
Enzymes [BR:
ming01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122083906
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
122083906
HDAC complexes
Sin3A-HDAC complex
122083906
BRAF-HDAC complex
122083906
REST complex
122083906
SHIP complex
122083906
MiDAC complex
122083906
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122083906
Heterochromatin formation proteins
Other heterochromatin formation proteins
122083906
Chromatin remodeling factors
NuRD complex
122083906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
GP67
Motif
Other DBs
NCBI-GeneID:
122083906
NCBI-ProteinID:
XP_042507772
LinkDB
All DBs
Position
7:36438394..36460420
Genome browser
AA seq
501 aa
AA seq
DB search
METGGNSLPSGLDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VLKPFPARDRDLCRFHADDYISFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLDEIRAKLLDSLSKLRHAPSVQFQERPPDTELPEADEDQDDADERWDPDSDMEV
DDERKPLPSKVKREIIEPELKDLENQKGIAEHARGVDGTAEDISFSKASDVGSMSIDEPV
SIKVEQENMNKLPDQSVKMHP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggcggcaattctcttccatctgggcttgatggggtgaaaagaaaggtctcg
tacttctatgatccggaggttggcaattactattatgggcaaggccacccaatgaagcca
cataggattcggatgactcatgctctccttgcccattatggattgcttcaaaatatgcag
gttttgaagccctttcctgcaagagatagagatctttgccggttccatgctgatgattac
atctccttcctaaggggcatcaccccagaaacacagcaggatcagctaaggcaactaaag
aggttcaatgtaggtgaagactgcccggtatttgatggcttgtactctttttgtcagact
tatgctggtgggtctgtaggtggttctgtgaagttaaaccatgggctttgcgacattgct
atcaattgggctggtggacttcatcatgctaagaagtgtgaggcttctggattttgttat
gttaacgatattgtgctggcaatattggaacttctcaagcaacatgagcgtgttctatat
gtggacatcgatatccatcatggagatggtgtagaggaggctttctacaccactgacagg
gtcatgactgtctctttccacaaatttggtgattatttccctggtacaggggacatacgt
gatattggatatgggaaagggaagtactactccctgaatgttcctttagatgacggaatt
gatgatgagagttaccagtccttgttcaaaccaatcattgggaaagtgatggaaattttt
aggcctggtgccgtggttctccagtgtggtgctgactccctatctggtgacaggttaggt
tgcttcaatctttccatcaaaggccatgcagaatgtgttagatacatgagatcatttaat
gtgcccctgttgctgctcggtggtggtggttataccatccgaaatgttgctcgttgctgg
tgttatgagacgggagttgcacttggtgtagaagttgatgacaagatgccacagcatgaa
tattacgagtattttggtccggattatacactccatgttgctcctagtaatatggagaat
aagaactcacgccaattattggatgaaattagagcaaagcttcttgacagtctctcaaaa
ctccggcatgcaccgagtgtccaatttcaggaacggccacctgatactgagctgcctgag
gcagatgaagatcaagatgatgcagatgaaagatgggatcctgattcagacatggaagtt
gatgatgaacgaaagcctctgcctagcaaagtgaaacgagaaattatagagcctgagctt
aaagatctggaaaatcagaaagggattgcagagcatgccagaggggtggacgggacagca
gaggatatctctttctcaaaggcttcagatgtgggttcaatgtcaatagatgaaccagtc
agcataaaagttgagcaagaaaatatgaacaagctgcctgatcagtctgttaagatgcac
ccttag
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