Macadamia integrifolia (macadamia nut): 122086621
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Entry
122086621 CDS
T07436
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122086621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122086621
Membrane trafficking [BR:
ming04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
122086621
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
WD40_like
ANAPC4_WD40
Ketoacyl-synt_2
Motif
Other DBs
NCBI-GeneID:
122086621
NCBI-ProteinID:
XP_042511506
LinkDB
All DBs
Position
8:1178518..1202364
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AA seq
962 aa
AA seq
DB search
MAQNPSENGIDGDDEREEEEEDEEEDEEEAEDEGEEEEEEEDEPRLKYQRMGGSIPSLLS
NDAASCIAVAERMIALGTHDGTVHILDLLGNQVKEFSAHNATVNDLSFDIEGEYIGSCSD
DGFVVINSLFTDESMKFDYHRPMKTIALDPLYSRNSSRRFVTGGLAGHLYLNSKKWIGYR
DQVLHSGEGPVHAVKWRTSFIAWANDAGVKVYDTANNQRLAFIERPQGSPRPELLLPHLV
WQDDTLLVIGWGTSVKIAAIRTNQYNGTNGIQRPISISSTKHVDIVASFQTSYFISGIAP
YGDALVVLAYIPEKEDGEKEFSSSVPSRQGTAQRPEVRIVTWKNDELATDALPVHGFEHY
KAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHITWLLQHGWHE
KALAAVEAGEGRTELVDEVGLRYLDHLILERKYAEAASLCPKLLRGSASAWERWVFHFAH
LRQLPVLVPYIPTENPRLRDTAYEVALVALATNLSFHKDLLSTVKSWPPAIYSALPVISA
IEPQFNTSSVTDTLKEALAELYVINAQYERALVLYADLMKPETFNFIEKHNLHDAIHDKV
VQLMVLDCKRAVSLLIQHKDMITPSEVVSQILDASDKCDSRYFLHSYLHALFENDPHAGK
DFHDMQVELYADYDAKMLLPFLRSSQHYTLEKAYDICVKRDLLREQVFILGRMGNSKQAL
AVIINKLEDIEEAIEFVAMQHDDELWEELIKQCLHKPDMVGVLLEHTVGNLDPLYIVKMV
PNGLTIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKCYKEARHAVCLGTGEE
ETRAKRDDRRAAQANGKVAGMGTMELKSKTRGGGRCCVCFDPFSIQKVSVIVFFCCHAYH
ITCLMDSTNSTSRKSGAQGTSQESVSNYDYSYEEEEDDNDDTQSGASRMRCILCTTATGS
HL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaatccttcagaaaacggcatcgacggtgacgacgaaagagaagaagaagaa
gaagacgaagaagaagatgaagaagaagcagaggatgaaggagaagaggaagaagaagag
gaggatgagccaaggctcaagtaccagaggatgggagggagcatcccttcgcttctctct
aacgacgccgcctcttgtatcgctgttgccgagcggatgattgctcttggtacccacgac
ggcaccgtccacatccttgatttactaggtaatcaggttaaggaattttctgctcacaat
gctactgtcaatgaccttagctttgacatagaaggagaatatataggaagctgttcagat
gacggatttgttgttataaacagccttttcactgatgaaagcatgaagtttgattatcat
cgtcctatgaagaccattgctctagacccactttattcaagaaattcttctcgaagattt
gttactggtggtctagcaggtcatctgtatctaaactcaaaaaaatggataggctaccgt
gaccaggttctgcactctggtgaaggtccagtacatgcagtgaagtggagaacaagtttt
attgcttgggctaatgatgctggtgtgaaagtttatgacactgccaataatcagcgactt
gcatttattgagagaccacaaggaagccctcgtcctgagctcttgctccctcacttggtt
tggcaggatgatactctcttggttattggctggggaacatctgtaaaaattgctgcgatc
agaacaaatcagtataatggaaccaacgggatacaaaggcctatatccatatccagtaca
aagcatgtggatattgtggcatcttttcaaacaagctatttcatttcaggaattgctccc
tatggtgatgcgttggttgttcttgcttatattcctgagaaagaggatggagagaaggaa
tttagcagttcggttccatctcggcagggaactgcacagaggccagaagtacgcatagtc
acatggaaaaatgacgaacttgcaacagatgcacttcctgtgcatggctttgaacattac
aaggcaaaggattattcccttgctcatgctcctttctcaggtagcagctatgcaggtggt
caatgggctgctggtgatgagcccttgtactacatagtatctccaaaggatgtagtaatt
gcaaagcctagggatgctgaagatcatataacttggcttcttcaacatggatggcatgaa
aaagcattagctgctgttgaagcaggagagggacgtactgagcttgttgatgaggtgggc
ttgcgatatcttgatcatttgattttggaaaggaaatatgctgaagctgcatctctgtgt
cccaagttattacgtggatctgcttctgcatgggagagatgggttttccactttgctcat
ctccgccagcttccggtgttggttccatacataccaacagaaaaccccaggttgcgtgat
actgcttatgaggtggctcttgtagccctagcaacaaatctatctttccacaaagatctc
ctatcaactgttaaatcctggccaccagcaatatattctgctttgccagtgatatcggca
atagaacctcaatttaatacttcgtctgtgaccgacacactcaaggaggcattggctgag
ttgtatgtaattaatgcacaatatgagagagcactagtgttgtatgctgatcttatgaag
cctgaaacgttcaacttcatcgaaaaacataacttacatgatgccattcatgacaaggtg
gttcaactgatggtattagactgcaaacgtgcagtctctttactgatccaacacaaggac
atgattactccatctgaagtagtttcacaaatcttggatgctagtgacaagtgtgattca
agatatttcttgcactcgtatctgcatgcactatttgaaaatgatccacatgctgggaag
gatttccatgacatgcaggtagagctctatgcagattatgatgcaaagatgctgcttcct
tttcttcgtagcagtcagcattacacgcttgaaaaggcatatgacatttgcgtcaaaaga
gatcttttgagagagcaggtgttcatccttgggaggatgggaaattcaaagcaggcactt
gctgttatcataaacaaattggaggatatagaagaggctattgaatttgtggccatgcag
catgatgatgaactttgggaagaactaatcaaacagtgtctccacaaacctgacatggtg
ggtgtgttgttggagcacactgttggcaatcttgatccactttatattgtaaaaatggtg
cccaatggcttgacgataccccgtcttagggatcgattggtcaaaatcatcactgattac
aggactgagacatctttaagacatggatgtaacgatatcctcaaggctgactgtgtcaac
ctcttggttaaatgttacaaggaagcccggcatgcagtttgcttgggtactggagaagag
gaaacccgagcaaaaagggatgatagaagagcagctcaggcaaatggaaaagtagctggt
atggggacaatggagctcaagtcaaaaactaggggtggtggaaggtgttgtgtgtgtttt
gatcccttctctattcagaaagtctcggtcattgtattcttctgctgtcatgcctaccat
attacctgtctcatggattccacaaattccaccagtcgtaagagtggggcccaaggaact
tcccaagaatctgtatcaaattatgattatagttatgaagaagaagaagatgataatgat
gatacccagtcgggtgcatctcgcatgcgttgtatcttatgtacgacagctacagggtca
catttgtaa
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