KEGG   Microbacterium sp. No. 7: AOA12_12935
Entry
AOA12_12935       CDS       T04102                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
mio  Microbacterium sp. No. 7
Pathway
mio03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mio00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AOA12_12935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mio03400]
    AOA12_12935
DNA repair and recombination proteins [BR:mio03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AOA12_12935
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AOA12_12935
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_29 AAA_16 nSTAND1 RsgA_GTPase AAA_25 APS_kinase DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: ALJ20757
UniProt: A0A0P0DLH4
LinkDB
Position
complement(2740608..2743505)
AA seq 965 aa
MPIVPVASASKLSVRGARVHNLKNVDLDIPRDALVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIHDYMRLLW
ARIGVPHCPECGERIQRQTVQQIADQLAELPERTRYQIVAPVVTQKKGEFVDLFKELSAK
GYARAVVDGELVQLAEPPALKKSYKHDIAVVVDRLVAAPDLLGRITDSVETALGLAGGIV
QVNFVDEEGDAAWQSFSEKLACPNGHPLQLTEIEPRTFSFNAPFGACPACSGLGTRMSVD
VDLMLGDEELSIAEGVILPWTTQGKGLYQYYERLLQGLADDLAFDLDTPWRDLRVDVQQA
VLHGENYKVTVKWRNKYGREMRYSSGFEGVVPYIERQYLQAESDTQRQRWAEYLREVPCP
VCDGARLKPEVLAVLVHGHSIAEASNLSLAEAHAFFADLQLTDREAKIAAQVLREIRLRL
DFLIQVGLTYLNLSRSAGSLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IETLLRLKSLGNTLIVVEHDEETVQAADWIVDIGPRAGVDGGEVVHSGPLGALLDDERSI
TGAYLSGRRSIATPAKRRKIDRKRQISVVGARENNLKNVSVDFPLGVLTAVTGVSGSGKS
SLVNDILYEVLAARLNGARTVPGKHTRVTGLEHLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRTLFSETPEAKARGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVDCEVCHG
KRYNRDTLSVHYKGKNIAEVLEMPIAEAAEFFEPIQAIHRYLKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLATELQRRSNGRSIYVLDEPTTGLHFEDVSRLLEVLNGLVDKGNSVIVI
EHNLDVIKSADWVIDLGPEGGSGGGEIIATGTPEQVAKAEGSHTGAFLAEILPAAASTRS
SRRAS
NT seq 2898 nt   +upstreamnt  +downstreamnt
gtgccgatcgtccctgttgcctcagcctcgaaactcagcgtccgcggagcccgcgtccac
aacctcaagaacgtggatctcgacatcccgcgcgatgcgctcgtggtgttcacgggtctc
tccgggtcgggcaagtcgagcctcgcgttcgacacgatcttcgccgagggccagcgccgc
tacgtcgagtcgctgagcgcgtacgcgcgtcagttcctgggccaggtcgaccgtcccgac
gtcgacttcatcgagggactgtcgcccgcggtcagcatcgaccagaagtcgaccaaccgc
aacccgcgctcgaccgtcggcacgatcaccgagatccacgactacatgcgcctgctgtgg
gcgcgcatcggcgtgccgcactgccccgagtgcggcgagcgcatccagcggcagaccgtg
cagcagatcgccgaccagctcgcggagctgcccgagcgcacgcgctaccagatcgtcgcg
ccggtcgtcacgcagaagaagggcgagttcgtcgacctcttcaaggagctgagcgcgaag
ggatacgcgcgtgccgtcgtcgacggcgagctcgtgcagctcgccgagccgccggcgctg
aagaagagctacaagcacgacatcgccgtcgtcgtcgaccgcctcgtcgcggcccccgac
ctgctcggccgcatcaccgactccgtcgagacggcgctgggtctggccggcggcatcgtg
caggtcaacttcgtcgacgaggagggcgacgcggcgtggcagagcttcagcgagaagctc
gcctgccccaatgggcacccgctgcagctgaccgagatcgagccgcgcaccttctcgttc
aacgcgccgttcggcgcgtgtcccgcgtgctcgggcctcggcacgcgcatgtcggtcgac
gtcgacctcatgctcggcgacgaggagctctcgatcgccgagggcgtgatcctgccgtgg
acgacgcagggcaagggtctgtaccagtactacgagcggctgctgcagggcctcgccgac
gacctcgccttcgacctcgacaccccctggcgcgacctgcgcgtcgacgtgcagcaggcc
gtgctgcacggcgagaactacaaggtcaccgtgaagtggcgcaacaagtacggccgcgag
atgcgctactcgtcggggttcgagggcgtcgtcccctacatcgagcgccagtacctgcag
gccgagtccgacacccagcgccagcgctgggccgaatacctgcgcgaggtgccgtgcccc
gtctgcgacggcgcccgcctcaagcccgaggtgctcgcggtgctcgtgcacgggcactcg
atcgccgaggcgtcgaacctcagcctcgccgaggcgcacgcgttcttcgccgacctgcag
ctgaccgaccgcgaggcgaagatcgccgcgcaggtgctgcgcgagatccggctgcgcctc
gacttcctcatccaggtcggcctcacctacctcaacctgtcgcgctcggccggctcgctc
tcgggcggtgaggcgcagcgcatccgcctcgcgacgcagatcggctccggcctcacgggc
gtgctctacgtgctcgacgagccgtcgatcggcctgcatcagcgcgacaaccgccgcctc
atcgagacgctgctgcgcctgaagagcctcggcaacaccctcatcgtcgtcgagcacgac
gaggagaccgtgcaggcggccgactggatcgtcgacatcggcccgcgcgcgggcgtcgac
gggggagaggtcgtgcactccgggccgctcggcgcgctcctcgacgacgagcggtcgatc
acgggcgcctacctgtccggccggcgcagcatcgcgacgccggcgaagcgccgcaagatc
gaccggaagcggcagatcagcgtcgtcggcgcgcgcgagaacaacctcaagaacgtctcc
gtcgacttcccgctcggcgtgctcaccgccgtcacgggcgtgtcgggctccggcaagtcg
tcgctcgtcaacgacatcctctacgaggtgctcgccgcgcgcctcaacggcgcccgcacc
gtccccggcaagcacacgcgcgtcacgggactggagcacctcgacaaggtcgtgcacgtc
gaccaggcgccgatcggccgcacgccgcggtcgaaccccgccacctacacgggcgtgttc
gaccgcatccgcaccctgttcagcgagacgcccgaggccaaggcgcgcggctaccagccg
ggccgcttcagcttcaacgtcaagggcggccgctgcgaggcctgctcgggcgacggcacg
atcaagatcgagatgaacttcctgcccgacgtctacgtcgactgcgaggtctgccacggc
aagcgctacaaccgcgacacgctgagcgtgcactacaagggcaagaacatcgccgaggtg
ctggagatgccgatcgccgaggcggcggagttcttcgagccgatccaggcgatccaccgc
tatctcaagacgctcgtcgacgtgggcctcggctacgtgcgcctgggccagtcggccacg
acgctctcgggcggcgaggcgcagcgcgtcaagctcgcgaccgagctgcagcgccggtcg
aacgggcgcagcatctacgtgctcgacgagccgacgacgggcctgcacttcgaagacgtc
agccgcctgctcgaggtgctgaacggcctcgtcgacaagggcaactccgtcatcgtcatc
gagcacaacctcgacgtcatcaagtcggccgactgggtcatcgacctcgggcccgagggc
ggctcgggcggcggcgagatcatcgcgaccggcacgcccgagcaggtcgcgaaggccgag
gggagccacacgggcgcgttcctcgccgagatcctgccggccgccgcctcgacgcgatcg
tcgcgcagggcgagctga

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