Microbacterium sp. No. 7: AOA12_12935
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Entry
AOA12_12935 CDS
T04102
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mio
Microbacterium sp. No. 7
Pathway
mio03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOA12_12935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mio03400
]
AOA12_12935
DNA repair and recombination proteins [BR:
mio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOA12_12935
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOA12_12935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_25
APS_kinase
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ALJ20757
UniProt:
A0A0P0DLH4
LinkDB
All DBs
Position
complement(2740608..2743505)
Genome browser
AA seq
965 aa
AA seq
DB search
MPIVPVASASKLSVRGARVHNLKNVDLDIPRDALVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIHDYMRLLW
ARIGVPHCPECGERIQRQTVQQIADQLAELPERTRYQIVAPVVTQKKGEFVDLFKELSAK
GYARAVVDGELVQLAEPPALKKSYKHDIAVVVDRLVAAPDLLGRITDSVETALGLAGGIV
QVNFVDEEGDAAWQSFSEKLACPNGHPLQLTEIEPRTFSFNAPFGACPACSGLGTRMSVD
VDLMLGDEELSIAEGVILPWTTQGKGLYQYYERLLQGLADDLAFDLDTPWRDLRVDVQQA
VLHGENYKVTVKWRNKYGREMRYSSGFEGVVPYIERQYLQAESDTQRQRWAEYLREVPCP
VCDGARLKPEVLAVLVHGHSIAEASNLSLAEAHAFFADLQLTDREAKIAAQVLREIRLRL
DFLIQVGLTYLNLSRSAGSLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IETLLRLKSLGNTLIVVEHDEETVQAADWIVDIGPRAGVDGGEVVHSGPLGALLDDERSI
TGAYLSGRRSIATPAKRRKIDRKRQISVVGARENNLKNVSVDFPLGVLTAVTGVSGSGKS
SLVNDILYEVLAARLNGARTVPGKHTRVTGLEHLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRTLFSETPEAKARGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVDCEVCHG
KRYNRDTLSVHYKGKNIAEVLEMPIAEAAEFFEPIQAIHRYLKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLATELQRRSNGRSIYVLDEPTTGLHFEDVSRLLEVLNGLVDKGNSVIVI
EHNLDVIKSADWVIDLGPEGGSGGGEIIATGTPEQVAKAEGSHTGAFLAEILPAAASTRS
SRRAS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcgtccctgttgcctcagcctcgaaactcagcgtccgcggagcccgcgtccac
aacctcaagaacgtggatctcgacatcccgcgcgatgcgctcgtggtgttcacgggtctc
tccgggtcgggcaagtcgagcctcgcgttcgacacgatcttcgccgagggccagcgccgc
tacgtcgagtcgctgagcgcgtacgcgcgtcagttcctgggccaggtcgaccgtcccgac
gtcgacttcatcgagggactgtcgcccgcggtcagcatcgaccagaagtcgaccaaccgc
aacccgcgctcgaccgtcggcacgatcaccgagatccacgactacatgcgcctgctgtgg
gcgcgcatcggcgtgccgcactgccccgagtgcggcgagcgcatccagcggcagaccgtg
cagcagatcgccgaccagctcgcggagctgcccgagcgcacgcgctaccagatcgtcgcg
ccggtcgtcacgcagaagaagggcgagttcgtcgacctcttcaaggagctgagcgcgaag
ggatacgcgcgtgccgtcgtcgacggcgagctcgtgcagctcgccgagccgccggcgctg
aagaagagctacaagcacgacatcgccgtcgtcgtcgaccgcctcgtcgcggcccccgac
ctgctcggccgcatcaccgactccgtcgagacggcgctgggtctggccggcggcatcgtg
caggtcaacttcgtcgacgaggagggcgacgcggcgtggcagagcttcagcgagaagctc
gcctgccccaatgggcacccgctgcagctgaccgagatcgagccgcgcaccttctcgttc
aacgcgccgttcggcgcgtgtcccgcgtgctcgggcctcggcacgcgcatgtcggtcgac
gtcgacctcatgctcggcgacgaggagctctcgatcgccgagggcgtgatcctgccgtgg
acgacgcagggcaagggtctgtaccagtactacgagcggctgctgcagggcctcgccgac
gacctcgccttcgacctcgacaccccctggcgcgacctgcgcgtcgacgtgcagcaggcc
gtgctgcacggcgagaactacaaggtcaccgtgaagtggcgcaacaagtacggccgcgag
atgcgctactcgtcggggttcgagggcgtcgtcccctacatcgagcgccagtacctgcag
gccgagtccgacacccagcgccagcgctgggccgaatacctgcgcgaggtgccgtgcccc
gtctgcgacggcgcccgcctcaagcccgaggtgctcgcggtgctcgtgcacgggcactcg
atcgccgaggcgtcgaacctcagcctcgccgaggcgcacgcgttcttcgccgacctgcag
ctgaccgaccgcgaggcgaagatcgccgcgcaggtgctgcgcgagatccggctgcgcctc
gacttcctcatccaggtcggcctcacctacctcaacctgtcgcgctcggccggctcgctc
tcgggcggtgaggcgcagcgcatccgcctcgcgacgcagatcggctccggcctcacgggc
gtgctctacgtgctcgacgagccgtcgatcggcctgcatcagcgcgacaaccgccgcctc
atcgagacgctgctgcgcctgaagagcctcggcaacaccctcatcgtcgtcgagcacgac
gaggagaccgtgcaggcggccgactggatcgtcgacatcggcccgcgcgcgggcgtcgac
gggggagaggtcgtgcactccgggccgctcggcgcgctcctcgacgacgagcggtcgatc
acgggcgcctacctgtccggccggcgcagcatcgcgacgccggcgaagcgccgcaagatc
gaccggaagcggcagatcagcgtcgtcggcgcgcgcgagaacaacctcaagaacgtctcc
gtcgacttcccgctcggcgtgctcaccgccgtcacgggcgtgtcgggctccggcaagtcg
tcgctcgtcaacgacatcctctacgaggtgctcgccgcgcgcctcaacggcgcccgcacc
gtccccggcaagcacacgcgcgtcacgggactggagcacctcgacaaggtcgtgcacgtc
gaccaggcgccgatcggccgcacgccgcggtcgaaccccgccacctacacgggcgtgttc
gaccgcatccgcaccctgttcagcgagacgcccgaggccaaggcgcgcggctaccagccg
ggccgcttcagcttcaacgtcaagggcggccgctgcgaggcctgctcgggcgacggcacg
atcaagatcgagatgaacttcctgcccgacgtctacgtcgactgcgaggtctgccacggc
aagcgctacaaccgcgacacgctgagcgtgcactacaagggcaagaacatcgccgaggtg
ctggagatgccgatcgccgaggcggcggagttcttcgagccgatccaggcgatccaccgc
tatctcaagacgctcgtcgacgtgggcctcggctacgtgcgcctgggccagtcggccacg
acgctctcgggcggcgaggcgcagcgcgtcaagctcgcgaccgagctgcagcgccggtcg
aacgggcgcagcatctacgtgctcgacgagccgacgacgggcctgcacttcgaagacgtc
agccgcctgctcgaggtgctgaacggcctcgtcgacaagggcaactccgtcatcgtcatc
gagcacaacctcgacgtcatcaagtcggccgactgggtcatcgacctcgggcccgagggc
ggctcgggcggcggcgagatcatcgcgaccggcacgcccgagcaggtcgcgaaggccgag
gggagccacacgggcgcgttcctcgccgagatcctgccggccgccgcctcgacgcgatcg
tcgcgcagggcgagctga
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