Microbacterium sp. No. 7: AOA12_15210
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Entry
AOA12_15210 CDS
T04102
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mio
Microbacterium sp. No. 7
Pathway
mio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOA12_15210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mio03021
]
AOA12_15210
03019 Messenger RNA biogenesis [BR:
mio03019
]
AOA12_15210
Transcription machinery [BR:
mio03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AOA12_15210
Messenger RNA biogenesis [BR:
mio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AOA12_15210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
NACHT
PIP5K
Mor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALJ21178
UniProt:
A0A0P0DML1
LinkDB
All DBs
Position
complement(3216159..3218369)
Genome browser
AA seq
736 aa
AA seq
DB search
MESISEIQIENADAESVENPPAAESETLDIVDASADDAATDVAVEEPAVEEAPADEPAAE
DVAAEEPAAEAAPVAEEEAPADEAAAVEAPVAEEPAVEAPAEAAEVPAEAAEPQADAVAA
EPQADAVAAEPQADTVAAEQAPAAEQPAEAAPVEEAPAAPVKAPRKRAPRRAKSTDAPKT
EDAPAAEAAPAPEAAESAAEPAAADAAQAPVVEPAVATEEQAAAAPAAPADAALADAAAP
AADGAEPQADAQPAEAEAPARGRGRSRSRSRSRAKADAAPETNGDKPAEEAPAEQPADDR
QGDRQADRTADRGAEQQPAQQQNGRSRQRNKRRGGGTADEFETEIGADDVLIPIAGILDV
LDNYAFVRTTGYLPGPQDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVK
VDAINGLSVDDAANRVEFSSLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVA
PPKAGKTIVLQQIANAIAINNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAED
HTTVAELAIERAKRLVELDRDVVVLLDSITRLGRAYNISAPTSGRVLTGGVDASALYPPK
RFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAV
DVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLKETQSNVEFLVQMQK
SIPTPSRDGGHDNGIR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccagatcgagaacgccgacgccgagagcgtcgagaaccct
ccggccgccgagagcgagacgctcgacatcgtcgacgcgagtgccgacgacgccgcgacg
gacgtagccgtcgaggagccggccgtcgaggaggcgcccgccgacgagccggccgctgag
gacgtcgccgccgaggagcccgcggccgaggccgcgccggtggccgaggaggaggcgccg
gctgacgaggccgctgccgtcgaggcgcccgtcgccgaggagcccgccgtggaggcgccc
gccgaggccgctgaggtgcccgccgaggccgccgagccgcaggccgacgccgtcgccgcg
gagccgcaggccgatgcggtagccgcggagccgcaggccgacacggtcgccgccgagcag
gctcccgccgcggagcagcccgccgaggccgcgccggtcgaggaggctcccgccgccccc
gtcaaggcgccgcgcaagcgcgcgccgcgccgggcgaagagcaccgacgcgcccaagacc
gaggacgcccctgcggccgaggccgcccccgcccccgaggccgcggagagcgccgccgag
cccgcggccgccgacgcggcgcaggcccccgtggtcgagcccgccgtcgcgaccgaggag
caggccgcggccgcccccgccgcgcccgcggacgccgcgctcgcggatgccgccgccccc
gcggccgacggcgccgagccgcaggccgacgcgcagcccgccgaggccgaggcccccgca
cgcggccgtggccgcagccgcagccgcagccgcagtcgtgccaaggccgacgccgccccc
gagaccaacggcgacaagccggccgaggaggcgcccgccgagcagcccgccgacgacagg
cagggcgaccggcaggccgacaggacggccgaccgcggcgccgagcagcagcccgcgcag
cagcagaacggccgcagccgccagcgcaacaagcgccgcggcggcggcacggccgacgag
ttcgagaccgagatcggcgccgacgacgtgctgatcccgatcgccggcatcctcgacgtg
ctcgacaactacgccttcgtgcgcacgaccggctacctgcccgggccgcaggacgtctac
gtctcgctcggccaggtgaagaagtacaacctgcgcaagggcgacgcggtcgtcggcgcc
atcaagcagccgcgcgagggcgagcagtcgagccgccagaagtacaacgcgctcgtcaag
gtcgacgcgatcaacggcctgagcgtcgacgacgccgcgaaccgcgtggagttcagctcg
ctcacgcccctctacccgcaggagcgcctgcgcctggagaccgcgcccgagaagctcacg
cagcgcatcatcgacctcgtcgcgcccatcggcaagggccagcgcggcctcatcgtcgcg
ccgcccaaggccggcaagacgatcgtgctgcagcagatcgcgaacgcgatcgcgatcaac
aaccccgaggtgcacctcatggtcgtgctcgtcgacgagcgccccgaagaggtcaccgac
atgcagcgcaccgtcaagggcgaggtcatcgcgtcgacgttcgaccgtccggccgaggac
cacacgaccgtcgccgagctcgccatcgagcgcgccaagcgcctcgtcgagctcgaccgc
gacgtcgtcgtgctgctcgactcgatcacgcgcctgggccgcgcctacaacatctcggcg
cccacctcgggccgcgtgctgaccggcggcgtcgacgcctcggcgctctacccgcccaag
cgcttcttcggcgccgcgcgcaacatcgagaacggcggctcgctcaccatcctcgccacc
gcgctcgtcgagaccgggtcgaagatggacgaggtcatcttcgaggagttcaagggcacc
ggcaacagcgagctgcgcctgtcgcgccagctcgccgacaagcgcatcttcccggccgtc
gacgtcaacgcgtcgagcacccgccgcgaggagatgctgctctcgcccgacgaggtcaag
atcacctggaagctgcgccgcgcgctcgcgggcctcgacccgcagcaggcgctcgaggtc
gtgctcggcaagctcaaggagacgcagtcgaacgtcgagttcctcgtgcagatgcagaag
tcgatcccgacgccgtcgcgcgacggcggccacgacaacggcatccgctga
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