Micromonas commoda: MICPUN_58155
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Entry
MICPUN_58155 CDS
T02695
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
mis
Micromonas commoda
Pathway
mis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MICPUN_58155 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_58155 (MSH3)
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MICPUN_58155 (MSH3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
8242807
NCBI-ProteinID:
XP_002501919
JGI:
MicpuN3_58155
UniProt:
C1E4U0
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Position
4:complement(1380981..1384583)
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AA seq
1200 aa
AA seq
DB search
MKRGRPSPGGAGKSGGGTAKSKPITSFFFKAPPKAPAGGGASAGAPSDGAPDASPSTATA
EATPAAKRRREDEGADDANAVDTSETPDPRTAVKASTDAAIPRMSAEEMLEAIGPSDPDR
HAAFVEKLGRRFIPREGGRVYERAGVEAEDGDPRGDERGEGDERRRADEDAGQDDADEGG
ARRRRAGKVATSKASASVKLTPLEEQVKKCKADHPGVLLLIEVGYKFHFYGEDAEIASKV
LNIFAYHPKDRLYLTASVPVPRLHIYVRRLVDAGHKVGVIRQTETAALKAAGETEGGKSG
VFERRLVGLYTRSTLEAGVAIASETSTNDEGESAAAQDGRTSAYLLCVAERPGDENDDGS
DRGTRIGVAAIDASTGDVRHDEFVDTRMRPGLEARLILTSPQEVLVVEPVSSATSKMIDA
MYGGSTSGVRVERVARGSGYEDGGAAAAVAAATAEFAARSGGRSGGVGATPAGGNVGEDA
GDNVGDALNLPEQTTRAVAVAFDWLRQFGLDGMLLLAPTFRPMSAAGEMNLAPNVLRQLE
MLRTRDGKHRGSLLWLLDDGTRTAAGARAIRRWVSHPLTNGDAIRTRLDAVEELRTEADA
GGALEPVFESLAKYHGARAGGKGGGDVERYLGRIFHGTATPAELVAALSAVGGFAKEIVS
AGGDSLGRTGLTRELLAAACDPAVVHTCDELLSRVDVEAARAGRATAATVLLPDPVKFPQ
LERTREAVASAERALQDLLPALRQKIIDNSKGGGKPQAGGKGGLQLTPRLTYTSVRQGSS
QVEHLIELPDTLPGIPTNWIRVSTNKSKKVVRYHPPEVLDAAATLEQSRERHSAACAAAW
RGFLADDAAGAFLELRAATRAAAGLDALASLASVARLDGYVKPTLLPDGHPPTIRFVDGR
HPTLEAVLDPGSFVPNSVDLRNDAVRALVITGPNMGGKSCFIRQTALLALMAQMGSYVPA
TVAELTVLDGVYTRMGASDNLAMGSSTFLEEMSECSSILRSATEKSLVVLDELGRGTSTH
DGVAVAHATLDYIISDLKPMCLFVTHYPDVARDLARKHRKHCDTQYPSYVEVDENDENGG
AEGGAGRIEFLYRLTPGVAHRSYGLNVARMAGVPADVVAAAASKAREMEEAVAARAMARD
VARFGPEEVERRSRETIRLAEEAAAAMDAALAAATPEEGAEIIRRAQAKVLAAMDATDAS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgggagaccgagccccgggggcgcgggaaagtccgggggcggtacggcgaag
agcaagcccatcacgtccttcttcttcaaggctccacccaaggcgcccgccggtggagga
gcgtcggctggtgcaccttccgatggtgcgcccgacgcgtcaccgtccaccgccaccgcc
gaggccacgccggccgccaagcgccgccgcgaggacgaaggcgccgacgatgcgaacgcc
gtcgataccagcgagacgccggatccgcggacagccgtgaaggcgtccacggatgcggcg
attccccgcatgtccgcggaggagatgctcgaagccatcgggccttcggaccccgacagg
cacgcggcgttcgtggagaagctgggacggagattcatcccgagggagggagggcgcgtg
tacgagcgagcgggcgtggaagcagaggacggagatccgcggggcgacgaacgaggagag
ggcgacgaacgacgacgcgcggacgaggacgccggccaggacgacgcggatgaaggaggc
gcgaggaggcggcgggccggcaaggtcgcgacgagcaaggcgtcggcgagcgtcaagctg
acgccgctcgaggagcaggtcaagaaatgcaaagccgaccaccccggggtcctcctgctc
atagaggtcgggtacaagttccacttctacggcgaggacgcggagattgcgtctaaagtg
ctgaacatattcgcgtaccatccgaaggaccggctctacctcaccgcgtccgtgcccgtg
cccaggctccacatatacgtcaggcggctcgtcgacgccggtcacaaggtgggcgtgatc
cgtcagacggagacggccgcgctgaaagcggcgggggagacggaggggggtaaatccggg
gtgtttgagcgaagactcgtcggcctctacacccggagcacgctcgaagcgggagtggcc
atcgcctcggagacttcgacgaacgacgagggcgagagcgcggcggcgcaggacgggagg
acgtccgcgtacctgctctgcgtcgcggagagaccgggagacgagaacgacgacggttca
gatcgcgggacgcgaataggcgtcgcggcgattgacgcgagcaccggcgacgtgcgacac
gacgagtttgtcgacacccggatgcgacccggtctggaggccaggctcatcctgacctcg
ccgcaggaggtgctcgtggtcgagccggtgtcatccgcgacgtcgaagatgatcgacgcg
atgtacggcggcagcaccagcggcgtgagggtggagagggtggcgagggggagcggttac
gaagacgggggagccgcggcggcggtggcggctgcgacggcggagtttgcggctaggtcg
gggggccggtccggcggcgtgggggcgacgccggccgggggtaacgtcggagaagacgcg
ggggataacgtcggcgacgcgctgaacctgccggagcagacgacgcgcgccgtcgccgtg
gccttcgactggctgagacagttcggcctggacggcatgctcctcctggcgcccacgttc
cgcccgatgtccgccgccggcgagatgaacctcgcgcccaacgtgctccggcagctcgag
atgctccgaactcgagacggcaagcaccgcgggtccttgttgtggctcctggacgacggc
acgcgaaccgccgcgggagcgagggcgatccgacggtgggtctcgcaccccctgacgaac
ggggacgccatccggacgcgactggacgccgtcgaggaactccggaccgaggccgacgcc
gggggcgcgctcgagcccgtgttcgagtccctcgccaagtaccacggcgcccgggcgggc
ggaaagggcggcggggacgtggagaggtacctgggacgcatcttccacggcaccgcgacg
cccgcggagctcgtcgccgctctctccgccgtcggtgggttcgcgaaggaaatcgtcagc
gccggcggcgactcgttgggaaggactggtttgacgagagagctgctcgccgccgcgtgc
gatcccgcggtggttcacacgtgcgacgagctgctgtcccgcgtggacgtcgaggcggcg
cgcgcggggagggcgaccgcggcgacggtgttgctcccggacccggtcaaatttccgcag
ttggaacggacgagggaggcggtggcgtcggcggagagggcgctgcaggatttgctcccg
gcgctccgccagaagataatcgacaactccaagggaggcggcaaaccccaggcgggcggc
aaaggcggtctgcagctgaccccgaggctgacgtacacgtcggtgaggcaggggagcagc
caggttgagcacctcatcgagctcccggataccctcccgggaattcccacaaactggatc
cgcgtgagcaccaacaagagcaagaaggtggtcaggtaccacccgcccgaggtactcgac
gccgccgcgacgctcgagcaatccagggagcgtcactccgccgcttgcgccgcggcgtgg
cgcgggttcctcgcagacgacgccgcgggcgcgtttctggagctcagggcggcgacgcgg
gcggcggcggggctcgacgccctcgcctcactcgcgtccgtggctcgactggacgggtac
gtcaagccgacgcttctgccggatggccacccgccgacgattcgattcgtggacgggcgg
caccccacgctggaggctgtcctcgatcccggctccttcgtccccaactcggtggatttg
cgcaacgacgcggttcgcgcgctcgtcatcaccggtcccaacatgggcggcaagtcctgc
ttcatacggcagacggcgctgctcgcgctcatggcgcagatgggctcgtacgttccggct
accgtcgcggagctcaccgtgctcgacggcgtgtacacccgcatgggcgcgagcgataac
ctcgcgatgggatcgtccacgtttctcgaggagatgtccgagtgttcctccattctgcgc
tcggcgacggaaaagtcgctcgtggttctggacgagctcgggcggggaaccagcacgcac
gacggcgtcgccgtggcgcacgctacgctcgattacatcatctccgacttgaagcccatg
tgtttgttcgtgacgcactacccggacgtggccagggatctcgctcggaaacaccggaag
cactgcgacacgcagtaccccagctacgtggaagtggacgaaaacgacgaaaacgggggt
gccgaaggaggtgccggcaggatcgagtttctgtaccggctcacgcccggcgtcgcgcac
aggtcatacggcttgaacgtggcgaggatggcgggtgttcccgccgacgtcgtcgccgcc
gccgcgtcaaaggcgagggagatggaagaggcggtggcggccagggcgatggcccgcgac
gtcgcgaggttcgggccggaagaagtggagaggcgatcgcgggagacgatacgcctcgcg
gaggaggcggcggcggcgatggacgcggcgctcgccgcggcgacgcccgaggagggagcg
gagatcatcaggagggcgcaggcgaaggtgctcgcggcgatggacgcgacggacgcgagc
tga
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