Micromonas commoda: MICPUN_60441
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Entry
MICPUN_60441 CDS
T02695
Name
(RefSeq) isocitrate dehydrogenase/citrate hydrolyase
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
mis
Micromonas commoda
Pathway
mis00020
Citrate cycle (TCA cycle)
mis00630
Glyoxylate and dicarboxylate metabolism
mis01100
Metabolic pathways
mis01110
Biosynthesis of secondary metabolites
mis01200
Carbon metabolism
mis01210
2-Oxocarboxylic acid metabolism
mis01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MICPUN_60441
00630 Glyoxylate and dicarboxylate metabolism
MICPUN_60441
Enzymes [BR:
mis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
MICPUN_60441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Aconitase
Aconitase_C
AcnX
Motif
Other DBs
NCBI-GeneID:
8245423
NCBI-ProteinID:
XP_002507787
JGI:
MicpuN3_60441
UniProt:
C1FF99
LinkDB
All DBs
Position
8:25613..30157
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AA seq
1514 aa
AA seq
DB search
MVELTAGEIPPELGIKKSAKIWWTLTDEAPALATHAFLPVVRRFLGPSGVSVETADISLA
ARILAAFPERLTPAQRRVDVLAKLGELAKTSRANIIKLPNVSASVYQLEQAISELNRKGF
DVPKYPSGDALSPEDAAIKARYGKVIGSAVNPVLREGNSDRRVAGPVKDFARANPHRLKD
WSGDSKTEVKSMPGDDFFGSEKSSVRTNAGSLRVELHAADGSVTVLKDSIPVEADEIFDA
ARLSRAKLTDFVEAELQRAAKDGVMVSLHLKATMMKVSDPILFGAVVATYFKKAFEKHAD
SLASVDANPNNGLKSVLDAVKSLPNAAEIAADFAACYTQPDRPKVAMVDSDKGITNLHVP
SDVIIDASMPAMIRDGGKMWNKDGELEDVVCLIPDRSYASVFQTCIDDCKANGKFDVSSM
GSVANVGLMAKKAEEYGSHDKTFQISADGVVKVVADDSDEVVFEHDVAAGDIWRMCQTKD
EAVRDWVKLAVQRARLTNTPAVFWLDSSRSHDSVLIDKVNAYLKDHDTSGLDISIKTPKE
AIEFSMARARKGEDTISVTGNVLRDYLTDLFPIIELGTSAKMLSIVPLLAGGGLFETGAG
GSAPKHVQQFTEENHLRWDSLGEYLALAVSLDDLALKTRNPKIKILAKGLTSATGKLLEL
NKSPGRKCGEPDNRAAHFYIAMWWAEAVARSFPSFKALASKLKESEDVIVKEMTDCQGKA
VDIGGYWLPDVEKCTLAMQPSATFNALIDEAVLMSALDPPGSKTVNEIYSSIEENLRIVR
RKLGNKPLTLAEKIVYGHLDDPEGAPAPERGVSYLKLRPDRVAMQDATAQMAILQFISSG
LPKTAVPTTIHCDHLIAAETGDVEDLGNAKTENAEVYDFLSSCGDKFGMGYWKPGAGIIH
QTVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMASLPWELKAPKVIGVNL
KGSLTNWTAPKDIILKVADILTVSGGTGAIIEYFGEGVDTMSATGMATICNMGAEIGATT
SVFTLSERQLEYLRETGREDVARLAAKNRANLVPDEGCEYDRVIEIDLDMLAPHINGPYT
PDLCTPVSELGARAAKEGWPVEISSCLIGSCTNSSYEDMAKCANLTRQALAAGLKYKIPF
FVTPGSRAVQVNIEKDGFVKDFEDAGATVLAKACGPCIGQWKRKMPPGVKNTIVTSYNRN
FAKRNDGNPDTHAFVTSPELVTMLAFSGRLDFNPYADTLPTPDGGQFSFKIPEGCPAIPP
SGWDIDDSIFQAPKADGSGVTINVNPESKRLELLEPFKEWDGKDYVDCPVLIKALGKCTT
DHISMAGPWLKFRGHLTNISDNMLIGAVNAENGETNAVVNQFTGKVGKVPEVARQYRDAG
VPWIVIGDKNYGEGSSREHAALEPRYLGGVAVVVRSFARIHETNLKKQGMLPLTFADPAD
YDKISGNAKVSIIGLENFQPGVPLALKVTNPDSEPFEVAVNQTFNDEQISWFRHGSALNF
MKWQNARATRSNVA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggtggagctcaccgcgggagagatcccgccggaactgggcatcaagaagtccgcaaag
atctggtggaccctgaccgatgaggcgcccgccctggccacgcacgccttcctccccgtc
gtgaggcgtttcctcggtcccagcggcgtgagcgttgagacggccgatatctccctcgcc
gcgcgtatcctcgccgccttccccgagcgccttacccccgcccagaggagggtcgacgtc
ctggccaagctcggcgaactcgccaagaccagtcgcgccaacatcatcaagctccccaac
gtctccgcgtcggtgtaccagctcgaacaggccatctcggagctcaaccgaaagggtttc
gacgttcccaagtacccgagcggcgacgcgctctcccccgaggatgccgcaattaaggcg
aggtacggcaaagtgattggcagcgcggttaaccccgtgctgcgcgagggcaacagcgac
cgacgcgtcgccggcccggtgaaggacttcgcccgggccaacccgcacaggctcaaggac
tggtcgggcgactccaagacggaggtcaagtccatgccgggtgacgattttttcggctcg
gagaagtcgtcggtgcgtaccaacgccgggtccctccgcgtcgagctgcacgccgccgac
gggtccgtgaccgtcctcaaggacagtatcccggtcgaagctgatgagattttcgacgcc
gccaggctgagccgcgccaagctcacagatttcgtcgaggctgagcttcagcgagcggcg
aaggatggcgtcatggtgtcgcttcacctcaaggcgacgatgatgaaggtctcggatccg
atcctctttggcgccgtggtcgcgacgtacttcaagaaggcgttcgagaagcacgccgat
tcgctcgcatccgtcgacgccaaccccaacaacggtctcaagtccgtcctcgacgccgtc
aagtctttgcccaacgcggcggagattgcggctgatttcgcggcgtgctacacgcagccc
gaccgccccaaggtggccatggtggactccgacaagggaatcaccaacctgcacgtcccc
tccgacgtcatcatcgacgcgtccatgcccgcgatgatccgcgacggcggtaagatgtgg
aacaaggatggcgagctcgaggatgtggtctgcctcatccccgaccgatcctacgccagc
gtgttccagacctgcatcgacgactgtaaggctaacggtaagttcgacgtgtcctccatg
ggcagcgtcgcaaacgtcggtctcatggcgaaaaaggctgaggagtacggctcgcacgac
aagacgttccagatttccgccgacggcgtcgtcaaggttgtcgccgacgattccgacgag
gtcgtgtttgaacacgacgtagccgccggggacatctggcgcatgtgccagaccaaggac
gaggcggtccgcgactgggtcaagctcgccgtgcagcgggcgaggctcaccaacactccc
gccgtgttttggctcgattcctccaggtcccacgactccgtcctcatcgacaaggtgaac
gcgtacctcaaggatcacgacacctccggcctcgacatctcgatcaagacgcccaaggag
gcgattgagttctccatggcgcgcgcccgtaagggcgaggacaccatctccgtcaccggt
aacgtcctgagagactacctcacggatctcttccccatcatcgagctgggcaccagcgcc
aagatgctctccatcgtgcccctgctcgcgggcggcggcttgtttgagacgggcgcgggc
ggatccgctcccaagcacgtgcagcagttcaccgaggagaaccaccttcgctgggacagc
ctcggcgagtacctcgccctggcggtttctctcgacgacctcgcgctcaagaccaggaac
cccaagatcaagatcctcgccaagggcctgacctcggccaccggcaagttgctcgagctc
aacaaatcaccggggaggaaatgcggcgagcccgacaatcgcgccgcgcatttctacatc
gccatgtggtgggccgaggccgtcgccaggtccttcccgtccttcaaggcgctcgccagc
aagctgaaggagtccgaggacgtcatcgtcaaggagatgaccgattgccagggcaaggct
gttgacattgggggttactggctccccgacgttgagaagtgcacgctcgctatgcagccc
agcgccactttcaacgcactgatcgacgaggccgtcctgatgtccgcgctcgatcccccc
gggagcaagactgtcaacgaaatctactcctccatcgaggagaacctgaggatcgtcaga
cgcaagcttgggaacaaacccctgaccctcgcagagaagattgtctacgggcacctcgac
gatcccgagggtgcccccgcgcccgagcgcggcgtgtcctacctcaagctccgccccgat
agggtcgccatgcaggacgccaccgcacagatggctatcctccagttcatctcctcgggt
ctgcccaagacggccgtgcccacgaccatccattgcgaccacctcatcgccgccgagact
ggcgacgttgaggacctcggcaacgcgaagacggagaacgcggaggtgtacgactttttg
tcatcgtgcggcgacaagtttggcatggggtactggaagcccggcgcgggtatcattcat
cagacggtgctggagaattacgccttccccggcggcctgatgatcggtaccgactcccac
acccccaacgcgggtggtttgggcatgtgcgccgtgggagtgggcggcgcggatgcggtg
gacgtcatggccagcctgccctgggagctcaaggcgccaaaggtgattggcgtcaacctg
aagggttcgctcactaattggaccgcgcccaaggatatcattctcaaggttgccgacatt
ctgaccgtctcgggaggcaccggcgccatcatcgagtactttggcgagggtgtggacacc
atgtccgccactggtatggccaccatctgcaacatgggtgcggagattggcgccacaacc
tccgtttttaccctctctgagcgccagctcgagtacctccgcgagactggccgggaggat
gttgccaggctggcggctaagaaccgcgccaacctggtccccgacgagggatgcgagtac
gatcgcgtgattgagattgacctcgacatgctcgcgcctcacatcaacggaccttacacc
cccgacctgtgcacccccgtgtccgagctgggcgcgagggccgcaaaggagggctggccc
gtggagatttcctcctgcctcatcgggtcgtgcaccaacagctcctacgaggacatggcg
aaatgcgccaacctcacccgccaggcgctcgccgcgggactcaagtacaagatcccgttc
ttcgtcacccctggctccagggcggtgcaggtgaacatcgagaaggatggcttcgtcaaa
gacttcgaggacgccggcgcgactgtccttgccaaggcgtgcggcccttgcatcggccag
tggaagcgcaagatgcccccgggggtgaagaacacgattgtcacctcctacaaccgcaac
tttgccaagcgcaacgacggaaaccccgacacgcacgcgtttgtcacgagccccgagctg
gtgaccatgctggcgttctccggcaggctcgactttaacccctacgccgacacccttccc
acccccgacggcggtcagttcagctttaagatccccgaaggctgtcccgccattcctccg
agcggctgggatatcgacgattccatcttccaggctcccaaggctgacggaagcggcgtg
acaatcaacgtcaaccccgagtccaagcgtctcgagcttctcgagccgttcaaggagtgg
gacggaaaggactacgtcgactgcccggtgctgatcaaggctctcggcaagtgcaccacc
gaccacatctccatggcaggtccctggctcaagttccgcggccacctcaccaacatcagc
gacaacatgctcatcggcgccgtcaacgccgagaacggcgagaccaacgcggttgtcaac
cagttcaccggcaaggtcggtaaggttcccgaagtcgcgcgtcagtacagggacgcgggt
gtgccctggatcgtcatcggcgacaagaactacggcgagggttccagccgcgagcacgcc
gcgctcgagccgaggtacctcgggggcgtcgcggttgtcgtgaggagcttcgccaggatc
cacgagacgaacctgaagaagcagggcatgctcccgttgacctttgccgaccccgcggac
tacgacaaaatatcgggcaacgccaaggtgtcaatcatcggcctcgagaacttccagccc
ggagtgcccctcgcgctcaaggtgaccaaccccgacagcgagccattcgaagtcgccgtc
aaccagaccttcaacgacgagcaaataagctggttcaggcacggttccgcgctcaacttc
atgaagtggcagaacgcgcgggcgacgcggagcaacgtcgcgtga
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