Micromonas commoda: MICPUN_71216
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Entry
MICPUN_71216 CDS
T02695
Name
(RefSeq) predicted protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_71216
Enzymes [BR:
mis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MICPUN_71216
Transfer RNA biogenesis [BR:
mis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MICPUN_71216
Prokaryotic type
MICPUN_71216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
8246169
NCBI-ProteinID:
XP_002504622
JGI:
MicpuN3_71216
UniProt:
C1ECC9
LinkDB
All DBs
Position
9:complement(<689491..>690250)
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AA seq
253 aa
AA seq
DB search
HTYALKLAYDGEAYLGFQYQPKGKTVQGEVERALTKLTGHDREFLGMQASGRTDTGVHAR
GQILHFYTKEPVSDLERFHKSLNGIMPKDVRCVEVMRPHPAFHARFHAVRKTYHYFLDPR
LVLDPFVRRHALHCGWKPPSVERLREAAAVFVGTHDFTSFSNKSRDKTLVRSPTRTIYRF
DVVEQPDGLIRLEVEGNGFLYRMVRNMVGALMLAATGEDGKFTAEDLRDMLEGKDRGVAP
MGAPPHGLFLHEV
NT seq
760 nt
NT seq
+upstream
nt +downstream
nt
cacacctacgcgctcaagctggcgtacgacggcgaggcgtacctcggctttcagtaccag
cccaagggcaagacggtgcagggggaggtggagcgcgccctgacgaagctgactgggcac
gacagggagttcctcggcatgcaggcgagcgggcggacggacacgggggtgcacgctcgc
gggcagatcctccacttctacacgaaggagcccgtgtcagacctcgagaggtttcacaag
agcctcaacgggatcatgcccaaggacgtccgatgcgtggaggtcatgaggccgcacccg
gcgttccacgccaggttccacgcggtgcgaaagacctaccactacttcctcgaccctcgg
ctcgtgctcgatcccttcgtcaggcgtcacgcgctgcactgcggatggaaaccccctagc
gtcgagaggctgcgagaggcggcggctgtgtttgtcggcacccacgactttacctcgttc
tcgaacaagtccagggacaagacgttggtgcgcagcccgacgcgaacaatatacaggttc
gacgtggtcgaacagccggatgggttgatacgcctggaggtggagggtaacggcttcttg
taccgcatggttcgtaacatggtcggcgcgcttatgctcgccgccactggcgaggatggg
aagttcaccgccgaggacctgagggatatgctggaaggaaaagacaggggcgtcgctccg
atgggggctccaccgcacgggctgttccttcacgaggtag
DBGET
integrated database retrieval system
