KEGG   Micromonas commoda: MICPUN_79903
Entry
MICPUN_79903      CDS       T02695                                 
Name
(RefSeq) histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mis  Micromonas commoda
Pathway
mis03082  ATP-dependent chromatin remodeling
mis03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MICPUN_79903
   03083 Polycomb repressive complex
    MICPUN_79903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mis03036]
    MICPUN_79903
Enzymes [BR:mis01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     MICPUN_79903
Chromosome and associated proteins [BR:mis03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     MICPUN_79903
   HDAC complexes
    Sin3A-HDAC complex
     MICPUN_79903
    BRAF-HDAC complex
     MICPUN_79903
    REST complex
     MICPUN_79903
    SHIP complex
     MICPUN_79903
    MiDAC complex
     MICPUN_79903
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     MICPUN_79903
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    MICPUN_79903
  Chromatin remodeling factors
   NuRD complex
    MICPUN_79903
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 8242119
NCBI-ProteinID: XP_002500502
JGI: MicpuN3_79903
UniProt: C1E1L2
LinkDB
Position
3:join(655294..655437,655620..657002)
AA seq 508 aa
MSGKPKISYFYDPDVGNFYYGQGHPMKPHRVRMTHNLLLHYGIYKEMEVFRPALASAEDM
TKFHSDEYIEFLRLITPDNQHEHMRQLKRFNCAEDCPVFDGLFNFCQIYTGGSVGGAVRL
NHKQTDTVVNWAGGLHHAKKNEASGFCYVNDIVLAILELLKVHQRVLYIDIDIHHGDGVE
EAFYTTDRVMTVSFHKFGEYFPGTGHLQDVGQHRGKYYSVNVPLKDGIDDEAYVALFKPV
MAKVMEMYQPDAVVFQSGADSLTGDRLGCFNLSIRGHGECLKYMQTFNVPLLVLGGGGYT
IRNVARCWTYETGCLLGHDLDNKLPVNDYSEYFGPTHELQIQPSNMENQNTPEYLQGILN
KILENLSKIPPKPSVPFHDVPPDAIDQDAMRVKEDPDAKGGGAEAEAARRSDPRELEPED
GDVDDKPSRHDASMRDVEDVDGGEKKVKEEKVEGADAVKAELGDAADVDDPDAAVKAEKG
GEGATDANDGDAANAGGPGIMASDHGDQ
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgagcgggaagcctaagatctcgtacttttacgaccccgacgtgggcaacttctactac
ggacagggtcatccgatgaagcctcaccgtgtccgcatgacccacaacctcctcctgcac
tacggcatctacaaggagatggaggtgttccgcccggcgctcgcgtccgccgaggacatg
accaagttccacagcgacgagtacatcgagttcctccgcctcatcacccccgacaaccag
cacgagcacatgaggcagctcaagcgcttcaactgcgccgaggactgcccggtgttcgac
ggcctgttcaacttctgccagatctacaccggcggctccgtgggcggtgcggtccgtctg
aaccacaagcagacggacaccgtcgtcaactgggcgggtggcctccaccacgcgaagaag
aacgaggcttccggcttttgctacgtcaacgacattgtgctcgcgatcctcgagctgctc
aaggttcaccagcgcgtgctgtacatcgacatcgacatccaccacggtgacggcgtggag
gaggccttctacaccaccgatcgcgtcatgaccgtctcgttccacaagtttggcgagtac
tttccgggcaccggacacctccaggacgtgggccagcaccgcggtaagtactactccgtc
aacgtcccgctcaaggacggcatcgacgacgaggcctacgtggcgctgttcaagccggtg
atggcgaaggtcatggagatgtatcagccggatgcggtggtgttccagtccggcgcggat
tccctcaccggcgacaggctcgggtgcttcaacctctccatccgcggccacggcgagtgc
ctgaagtacatgcagaccttcaacgtgcccctcctggtgctcggcggcggtgggtacacc
atccgcaacgtcgccaggtgctggacgtacgagaccggttgcctcctcggccacgacctc
gacaacaagcttccggtgaacgactactccgagtactttggccccacgcacgagctccag
atccagccgtccaacatggagaaccagaacacgcccgagtacctgcagggcatcctcaac
aagatcctcgaaaatttgagcaagatcccgcccaaaccgtccgtcccgttccacgacgtg
ccccccgacgccatcgaccaggacgccatgcgggtcaaggaggatccggacgccaagggc
ggcggcgcggaggctgaggcggcgcggcggtcggatccccgcgagctcgagcccgaggat
ggcgacgtcgacgacaagccgtccaggcacgacgcgtccatgcgcgatgtagaggacgta
gacggcggcgagaagaaggtcaaggaggagaaggtggagggagcggacgcggtcaaggcg
gagctcggcgacgcggctgacgtcgacgatcccgacgcggcggtcaaggcggagaagggc
ggcgagggcgcgacggacgcaaacgacggggacgcggcaaacgcggggggacctgggatc
atggccagcgaccacggcgatcagtga

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