Micromonas commoda: MICPUN_79903
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Entry
MICPUN_79903 CDS
T02695
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mis
Micromonas commoda
Pathway
mis03082
ATP-dependent chromatin remodeling
mis03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MICPUN_79903
03083 Polycomb repressive complex
MICPUN_79903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_79903
Enzymes [BR:
mis01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
MICPUN_79903
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
MICPUN_79903
HDAC complexes
Sin3A-HDAC complex
MICPUN_79903
BRAF-HDAC complex
MICPUN_79903
REST complex
MICPUN_79903
SHIP complex
MICPUN_79903
MiDAC complex
MICPUN_79903
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
MICPUN_79903
Heterochromatin formation proteins
Other heterochromatin formation proteins
MICPUN_79903
Chromatin remodeling factors
NuRD complex
MICPUN_79903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
8242119
NCBI-ProteinID:
XP_002500502
JGI:
MicpuN3_79903
UniProt:
C1E1L2
LinkDB
All DBs
Position
3:join(655294..655437,655620..657002)
Genome browser
AA seq
508 aa
AA seq
DB search
MSGKPKISYFYDPDVGNFYYGQGHPMKPHRVRMTHNLLLHYGIYKEMEVFRPALASAEDM
TKFHSDEYIEFLRLITPDNQHEHMRQLKRFNCAEDCPVFDGLFNFCQIYTGGSVGGAVRL
NHKQTDTVVNWAGGLHHAKKNEASGFCYVNDIVLAILELLKVHQRVLYIDIDIHHGDGVE
EAFYTTDRVMTVSFHKFGEYFPGTGHLQDVGQHRGKYYSVNVPLKDGIDDEAYVALFKPV
MAKVMEMYQPDAVVFQSGADSLTGDRLGCFNLSIRGHGECLKYMQTFNVPLLVLGGGGYT
IRNVARCWTYETGCLLGHDLDNKLPVNDYSEYFGPTHELQIQPSNMENQNTPEYLQGILN
KILENLSKIPPKPSVPFHDVPPDAIDQDAMRVKEDPDAKGGGAEAEAARRSDPRELEPED
GDVDDKPSRHDASMRDVEDVDGGEKKVKEEKVEGADAVKAELGDAADVDDPDAAVKAEKG
GEGATDANDGDAANAGGPGIMASDHGDQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaagcctaagatctcgtacttttacgaccccgacgtgggcaacttctactac
ggacagggtcatccgatgaagcctcaccgtgtccgcatgacccacaacctcctcctgcac
tacggcatctacaaggagatggaggtgttccgcccggcgctcgcgtccgccgaggacatg
accaagttccacagcgacgagtacatcgagttcctccgcctcatcacccccgacaaccag
cacgagcacatgaggcagctcaagcgcttcaactgcgccgaggactgcccggtgttcgac
ggcctgttcaacttctgccagatctacaccggcggctccgtgggcggtgcggtccgtctg
aaccacaagcagacggacaccgtcgtcaactgggcgggtggcctccaccacgcgaagaag
aacgaggcttccggcttttgctacgtcaacgacattgtgctcgcgatcctcgagctgctc
aaggttcaccagcgcgtgctgtacatcgacatcgacatccaccacggtgacggcgtggag
gaggccttctacaccaccgatcgcgtcatgaccgtctcgttccacaagtttggcgagtac
tttccgggcaccggacacctccaggacgtgggccagcaccgcggtaagtactactccgtc
aacgtcccgctcaaggacggcatcgacgacgaggcctacgtggcgctgttcaagccggtg
atggcgaaggtcatggagatgtatcagccggatgcggtggtgttccagtccggcgcggat
tccctcaccggcgacaggctcgggtgcttcaacctctccatccgcggccacggcgagtgc
ctgaagtacatgcagaccttcaacgtgcccctcctggtgctcggcggcggtgggtacacc
atccgcaacgtcgccaggtgctggacgtacgagaccggttgcctcctcggccacgacctc
gacaacaagcttccggtgaacgactactccgagtactttggccccacgcacgagctccag
atccagccgtccaacatggagaaccagaacacgcccgagtacctgcagggcatcctcaac
aagatcctcgaaaatttgagcaagatcccgcccaaaccgtccgtcccgttccacgacgtg
ccccccgacgccatcgaccaggacgccatgcgggtcaaggaggatccggacgccaagggc
ggcggcgcggaggctgaggcggcgcggcggtcggatccccgcgagctcgagcccgaggat
ggcgacgtcgacgacaagccgtccaggcacgacgcgtccatgcgcgatgtagaggacgta
gacggcggcgagaagaaggtcaaggaggagaaggtggagggagcggacgcggtcaaggcg
gagctcggcgacgcggctgacgtcgacgatcccgacgcggcggtcaaggcggagaagggc
ggcgagggcgcgacggacgcaaacgacggggacgcggcaaacgcggggggacctgggatc
atggccagcgaccacggcgatcagtga
DBGET
integrated database retrieval system