Methylomagnum ishizawai: MishRS11D_39860
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Entry
MishRS11D_39860 CDS
T07434
Symbol
groL7
Name
(GenBank) 60 kDa chaperonin 7
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MishRS11D_39860 (groL7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
misz03019
]
MishRS11D_39860 (groL7)
03110 Chaperones and folding catalysts [BR:
misz03110
]
MishRS11D_39860 (groL7)
03029 Mitochondrial biogenesis [BR:
misz03029
]
MishRS11D_39860 (groL7)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
misz04147
]
MishRS11D_39860 (groL7)
Enzymes [BR:
misz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MishRS11D_39860 (groL7)
Messenger RNA biogenesis [BR:
misz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MishRS11D_39860 (groL7)
Chaperones and folding catalysts [BR:
misz03110
]
Heat shock proteins
HSP60 / Chaperonin
MishRS11D_39860 (groL7)
Mitochondrial biogenesis [BR:
misz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MishRS11D_39860 (groL7)
Exosome [BR:
misz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MishRS11D_39860 (groL7)
Exosomal proteins of other body fluids (saliva and urine)
MishRS11D_39860 (groL7)
Exosomal proteins of breast cancer cells
MishRS11D_39860 (groL7)
Exosomal proteins of colorectal cancer cells
MishRS11D_39860 (groL7)
Exosomal proteins of bladder cancer cells
MishRS11D_39860 (groL7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBL76888
LinkDB
All DBs
Position
complement(4456641..4458323)
Genome browser
AA seq
560 aa
AA seq
DB search
MSKRLVFDGEARAGILKGIDILGRAVETTYGYQGPCVMVQHRTQGLPPFFTRDGVTVANS
VVLGDRLADLGARMLRDVANAVSREAGDGTTTAVVLARAIARGLLRSLAAGADPHRLREG
MDAAVKVVEEDLRRRALPLQGDMAAQVAEVSMRKEGRVGRLLQQAYAEVGPDGAVTVAPG
WTREDTLDIGEGFRYELGFLSPGFETDPVRRAADIEGARVLLYHGTVTDFMDLVPLLEAV
NEAGQALVIACDGIDERPLQGLVMNVKRGVFRALAVKAPGHGDRRRDWLDDLATATGARV
LVPERGDNLERAAPEVLGHAAKVVADADSASFIGCGGDPDAVARRVAGLGKEADAIRARK
PGEGSPTGNLHDLEDLEARISALVGRIATVRVGGTTEPEIKERLQRAENARRSVRAALEE
GVVPGGGVGLLQAREALGRLLLTDLDWQRGVAIVSEALEQPFRALVGNAGINPMAALARI
ETAGDARFGYDASSGAFGDLVAAGVLDPVKVLRLALAQAAGIAATVLSSGAVVLNEQSGL
PHLPGFSAEWAAATREDPRA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcctggtgttcgacggcgaggcccgcgccggtatcctcaagggcatcgat
atcctgggccgggcggtggaaaccacctatggctaccaagggccgtgcgtcatggtccag
caccggacccagggcctgccgccgttcttcacccgcgacggggtgacggtggccaattcc
gtggtgctgggggaccggctcgccgacctcggggccaggatgctgcgcgatgtggccaac
gccgtgtcgcgggaggcgggcgacggcaccaccaccgccgtggtgctggcccgcgccatc
gcccgcggcctcttgcgcagcctcgccgccggggccgatccccaccgcctgcgcgaaggc
atggacgccgccgtgaaagtggtcgaggaagacctgcgccgccgcgccctgccgctgcaa
ggcgatatggcggcccaggtggccgaggtatccatgcgcaaggaaggccgggtgggccgc
ctgctgcaacaagcctatgccgaggtcggcccggatggggccgtcacggttgcaccgggc
tggacccgcgaggacacgctggatatcggcgaaggcttccgctacgaactgggcttcctg
tcgccgggtttcgagaccgacccggtgcggcgggcggcggacatcgaaggggcgcgggtg
ctgctataccacggcaccgtgaccgatttcatggatttggtcccgctgctggaggcggtc
aacgaggcgggccaagccctggtcatcgcctgcgacggcatcgacgagcgcccgctgcaa
ggcttggtgatgaacgtcaagcgcggggtgttccgcgccctggcggtcaaggcgccgggc
catggcgaccgccgccgcgattggctggacgatctcgccaccgcgaccggggcgcgggtg
ctggtgccggaacgcggcgacaacctggagcgcgctgccccggaggttctcggccatgcc
gccaaggtggtggccgacgccgacagcgccagcttcatcggctgcggcggcgacccggac
gccgtggcccggcgggtcgcgggtttggggaaggaggcggacgcgatccgcgcccgcaag
ccgggcgagggttcccccaccggtaatctgcacgacctggaagacttggaagcccgcatc
tcggccttggtcgggcgcatcgccaccgtgcgggtgggcggcaccaccgaacccgagatc
aaggaacgtctgcaacgggccgagaacgcccgccgctcggtgcgggcggccttggaagaa
ggcgtggtgccgggcggcggcgtgggtttgctccaggcgcgggaagccttgggccgttta
ttgctgaccgatctggattggcaacgcggcgtcgccatcgtctcggaggcattggagcag
ccgttccgcgccctggtcggcaatgccgggatcaacccgatggcggccctggcccggatc
gaaaccgccggggacgcccgcttcggctacgacgcttccagcggcgcgttcggcgatttg
gtggcggcgggcgtcctggacccggtcaaggtcttgcgcctggccctggcccaggcggcg
ggcatcgccgccaccgtgctgtccagcggcgcggtggttttgaacgagcaatcgggcttg
ccgcatttgccggggttcagcgcggaatgggccgcagccacccgcgaagaccccagggcg
tga
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