Mycobacterium intracellulare MOTT-02: OCO_09340
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Entry
OCO_09340 CDS
T01754
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OCO_09340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_09340
Enzymes [BR:
mit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OCO_09340
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OCO_09340
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OCO_09340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AFC47298
LinkDB
All DBs
Position
919470..920333
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPPINALHGQTVVGADRWGKYLG
LRTDDLYLVAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVSDPQQIPQIASLGPDALDLGPDDLARVLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSEKQLAALHDAMITVLTDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgagatcgaagcgctggccgatcatctacggcgcaacgccgtgggc
ctgacggtcggccgcgtcgacatcgccgccctgtccgtcctgaagaccttcgacccgccg
atcaacgcgctgcacggccagaccgtggtcggcgccgaccgctggggcaaatacctgggg
ctgcggacggacgacctctacctggtcgcccacttgtcccgggcgggctggttgcggtgg
tccgacaagctggccgcggcgccgctgcgccccggcaagggcccgatcgcgctgcgcgtg
cacctgggcacgcccggtgaggcgcccggcttcgacctcaccgaggccggcacccagaag
cggctggcggtgtggctggtaagcgacccgcagcagatcccacagatcgcctcgctcggg
ccggacgcgctggacctcggccccgacgacctggcccgcgttctggcgggcaacaccggg
cggatcaagaccgtcatcaccgaccagaaggtgatcgccggcatcggcaacgcctacagc
gacgagatcttgcacgtcgcgaagatctcgccgttcgccaccgccggcaagctgtccgag
aagcagctcgccgcgttgcacgacgccatgatcaccgtgctcaccgacgcggtgagccga
tccgtcggccagggcgcggccacgctcaagggtgagaagcgctccggattgcgcgtgcac
gcccgcacgggactgccctgcccggtgtgcggggacaccgtgcgcgaagtgtcattcgcg
gacaagtcttttcagtattgtccgacgtgtcagaccggaggcaaggtcctggccgaccgg
cggatgtcgcgtttgctgaagtag
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