Mycobacterium intracellulare MOTT-02: OCO_10010
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Entry
OCO_10010 CDS
T01754
Name
(GenBank) sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mit
Mycobacterium intracellulare MOTT-02
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mit03021
]
OCO_10010
Transcription machinery [BR:
mit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCO_10010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
SnoaL_2
DUF4440
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFC47365
LinkDB
All DBs
Position
complement(985815..986726)
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AA seq
303 aa
AA seq
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MTRAPTGSEHAERFTLLRPLLFTIAYEMLGSATEADDVLQDSYLRWSAVDLSTVRDTKSY
LAQLVTRQALNALRADARRREEYVGPWLPEPLLLEDQDPSADVVLAESISMAMLVLLETL
SPDERAVFVLREVFGFDYGEIAQAVGKPAPTVRQVAHRAREHVRARRKRFEAADPERTAE
ITAQFLAAAAGGDVEALMTMLAPDATWTADSGGVVSAARRPVVGADKVARAIAGLMRRAA
EMAALRVETVTCNGAPAVLLYLGDQLEGVITVEIADDKITNFYVMRNPRKLAALATARDI
SRG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgcaccgaccggcagcgagcacgccgaacgcttcaccctgctgcggccgctg
ctgttcaccatcgcctacgagatgctgggctcggcgaccgaggccgacgacgtgctgcag
gacagttatctgcggtggtcggccgtcgacctgtcgacggtgcgcgacaccaagtcctac
ctggcccagctggtcacccggcaggcgctcaacgcgctgcgggccgacgcccgccggcgc
gaggagtacgtgggcccgtggctgcccgagccgctgctcctcgaagaccaggacccgtcc
gcggatgtcgttctcgcagagtcgatttcgatggcaatgctggtcctgctggagacgctg
agccccgacgagcgggccgtgttcgtgctgcgcgaggtgttcggcttcgactacggcgag
atcgcccaggcggtgggcaagccggcgcccacggtgcgacaggtggcgcaccgggcccgt
gaacacgtgcgggcccggcgcaagcggttcgaggcggccgacccggagcgcaccgcggag
atcaccgcccagttcctggccgcggcggcggggggcgacgtggaagcgctgatgaccatg
ctggccccggacgccacgtggacggccgacagcggcggcgtggtgagcgccgcccgacgg
ccggtggtcggcgccgacaaggtggcccgggcgatcgccgggctgatgcgcagggccgcg
gagatggccgcgctgcgggtggagacggtgacctgcaacggcgcgccggcagtgctgctc
tacctgggcgaccagctcgaaggggtgatcacggtggagatcgccgacgacaagatcacc
aacttctacgtcatgcgcaacccgcgcaaactggcggcgctggccaccgctcgcgacatc
agccgcggctga
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