Mycobacterium intracellulare MOTT-02: OCO_24240
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Entry
OCO_24240 CDS
T01754
Name
(GenBank) hypothetical protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mit
Mycobacterium intracellulare MOTT-02
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mit03021
]
OCO_24240
Transcription machinery [BR:
mit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCO_24240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2275
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
zf-HC2
HTH_23
DUF2304
Motif
Other DBs
NCBI-ProteinID:
AFC48787
LinkDB
All DBs
Position
complement(2541839..2543161)
Genome browser
AA seq
440 aa
AA seq
DB search
MDGERPQVLAQQVDAHLESCRSCRSWLIGAAAQTRRFASVAPGEGPDLVDKIMASIDDQA
SGHPRWMRWLRSHYRRWGLIAVGLFQVAIAAAQISGVDFGMVSGHMHGAMSGEHLMHEST
AWLLALGLAMVAAGVWPASASGVAAITGVYSVALLGYVIVDAFDGQVTATRIASHMPLLL
GLAFALLVARERVGSHRRHGSDGAADADYPASAADPSSGRRRGHLRPINHAAPDHAAPST
TTRRRIGKPAQLRWLSMIAPSDDEAVTELALSAARGNARALEAFIKATQQDVWRFVAYLS
DAGNADDLAQETFLRAIGAIERFSGRSSARTWLLSIARRVVADHIRQLQSRPRAALGADP
EHVVRGDRNARGFEDLVEVTTMIAGLNPEQREALLLTQLLGLPYADAAAVCGCPVGTIRS
RVARARDALLADGERSDLTG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttggatggtgagcgaccccaggtgctcgcgcagcaggtcgacgcccaccttgaatcgtgc
cgcagttgccgttcctggcttatcggggcggcggcgcagacccgtcggttcgcctcggtg
gcgcccggcgagggacccgacctggtcgacaagatcatggccagcatcgacgaccaagcc
tccggacacccgaggtggatgcgctggttgcggtcgcactaccggcgctggggtttgatc
gcggtgggcctgttccaggtggcgattgccgcggcccagatcagtggcgtcgatttcggc
atggtgtccggtcacatgcacggcgcgatgtcgggcgagcacctgatgcacgagtcgacg
gcgtggttgttggcgttgggcctggcgatggtcgccgccggcgtctggcccgcctccgcg
tcgggggtggcggcgatcaccggcgtgtattccgttgcgctgcttggttatgtgatcgtc
gacgccttcgacggacaggtcacggccacccggatcgccagccacatgccgctgttgttg
ggcctcgcgttcgcgttgttggtggcgcgcgagcgcgtgggctcgcaccggcggcacggc
tccgacggcgcggccgacgccgactaccccgcctcggcggccgacccgtcgagcggtcga
cggcgcgggcacctgcggccgatcaaccacgccgcccccgaccacgccgcgccctctacg
acgacccgtcgtaggatcggaaaacccgcgcaactaaggtggttgagcatgatcgcgccg
agcgacgacgaggcggtaaccgagctcgctttgtccgccgcgcgcgggaacgcgcgagcg
ctcgaggcgttcatcaaagccacccagcaagacgtgtggcggttcgtcgcctacctctcc
gatgccggcaacgccgacgatctggcccaagagacgttcctgcgcgccatcggcgccatc
gagcggttctccggacgctcgagcgcccggacgtggctgctgtccatcgcgcgccgggtc
gtggccgatcacatccgccagttgcagtcgcggccgcgtgccgcgctgggcgccgatccc
gaacacgtggtgcgcggcgaccgcaacgcccgcgggttcgaagacctcgtcgaggtgacg
acgatgatcgccggcctcaatcccgaacagcgggaagcgcttttgctcacccagttgctc
gggctgccctacgccgacgccgccgcggtgtgcggttgcccggtgggcaccatccggtcg
cgggtcgcgcgcgcccgcgatgcgctgctggccgacggcgagcgcagcgacctaaccggc
tag
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