Mycobacterium intracellulare MOTT-02: OCO_50490
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Entry
OCO_50490 CDS
T01754
Name
(GenBank) RNA polymerase factor sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mit
Mycobacterium intracellulare MOTT-02
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mit03021
]
OCO_50490
Transcription machinery [BR:
mit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCO_50490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
SnoaL_3
Sigma70_ECF
NTF2
SnoaL_4
Alpha-E
Motif
Other DBs
NCBI-ProteinID:
AFC51411
LinkDB
All DBs
Position
5293509..5294462
Genome browser
AA seq
317 aa
AA seq
DB search
MPAQEEFVERAAPFRAELIAHCYRMLGSVHDAEDLVQETYLRGWRGYQAFEERAALKTWL
YRIATTACLRALENRARRVLPAGLGEGSMDPDADLGAAGAHAWLEPIPDDMMFKSPEEDF
TAKQSVRLAVMTALQELPARQRAVLILRDVVQFSAAEVAELLETTPAAVNSSLQRARAHL
AELSPSEEQMAEPGDARRRELLDRYCAAFENADMAALTALLQADVKLEMPPLPVWFAGRD
TVLKFLAERAVAQPGDIAMVPTAANAQPAVAEYRRAADHVLRAHSIHVLTPGRDGIAGIT
VFLDPDLFSAFGLSSTR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgccggcgcaggaggagttcgtcgagcgggcggcgccgtttcgtgccgagctgatcgcg
cattgctaccgcatgctgggctcggtgcacgacgccgaagacctcgtgcaggagacgtat
ttgcggggctggcggggctatcaggccttcgaggaacgcgcggcgttgaagacctggctg
taccggatcgcgacgacggcctgtctgcgcgcgctggaaaaccgcgcccgccgcgtgctg
ccggccgggctgggcgagggctcgatggacccggacgccgacctcggtgcggcgggcgcg
cacgcgtggctcgaacccatcccggacgacatgatgttcaagagccccgaggaggacttc
accgcgaagcagagcgtgcggctggccgtgatgaccgccctgcaggagcttccggcgcgc
cagcgcgcggtgctgatcctgcgcgacgtcgtgcagttcagcgccgccgaggtcgccgag
cttctggagaccacgccggccgcggtcaacagttcgctacagcgcgcccgggcccacctc
gccgagctgtcccccagcgaggaacagatggccgagccgggcgacgcccggcggcgcgaa
ctgctcgaccggtattgcgcggcattcgaaaacgcggacatggcggcgctgaccgcgctg
ctgcaggcggacgtcaaactcgaaatgccgcccctcccagtgtggttcgccggccgggac
acggtgctgaagttccttgccgagcgtgccgtggcgcagcccggcgatatcgcgatggtt
ccgaccgccgcgaacgcgcaacccgccgtcgccgagtaccgccgcgccgccgatcacgtg
ttgcgggcccattcgatccacgtcttgacccccggtcgcgacgggatcgccggcatcacc
gtctttctcgaccccgacttgttcagcgcgtttggtttgtcttcaacccggtaa
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