Methanocaldococcus jannaschii: MJ_1652
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Entry
MJ_1652 CDS
T00003
Name
(GenBank) DNA topoisomerase I (topA) {Bacillus subtilis
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mja
Methanocaldococcus jannaschii
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mja03032
]
MJ_1652
03400 DNA repair and recombination proteins [BR:
mja03400
]
MJ_1652
Enzymes [BR:
mja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJ_1652
DNA replication proteins [BR:
mja03032
]
Prokaryotic type
DNA Topoisomerases
MJ_1652
DNA repair and recombination proteins [BR:
mja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJ_1652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
zf-ribbon_3
ADK_lid
DUF1272
Lar_restr_allev
zinc_ribbon_2
SAP
DZR
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AAB99673
UniProt:
Q59046
LinkDB
All DBs
Position
1633490..1635775
Genome browser
AA seq
761 aa
AA seq
DB search
MAEIMTALIICEKPSVAKKIANALGKAKKKSIDGVPYYELERDGKKIIVASAVGHLFTLV
EKENKEFGFYPVFDIKWVPASVDKGKEYVNKYIKALKKLSKDADEFYIATDWDIEGELIG
YHALKYCCGREKAKRMRFSSLTKKEIVRAFENPDEIDYGLVDAGESRHILDWYFGINLSR
ALMNAIRAVNRWKTMSVGRVQGPALAFLTERELEIKKFIPKPYWVIEALLKDNLKAIHEK
EKFWNEKEAKNVYEKIKDEKSAKVVEIKKTKRKLKPLPPFDLGTLQREAYSYFKISPKET
QEIAQKLYENALISYPRTSSQKLPKDRKYLEDILNIIKNHPVYGKWAERILKENLKPVEG
KKEDPAHPAIHIVDIPKEELSEKEKEIYDLIARRTLAAFWDNAEREYLNVKIDIKGEKFK
LSGSRTVKEGWHEIYYFPKFDEIELPPLKKNDIIKVEKITITRKETQPPKRYTVASIIKE
LEKRGLGTKATRAEIIDKLIKRGYVIDDGSLKVTDLGISVIETLKRFCPEIIDEKMTRDL
EEKLEKIQFRKIKKDDVLDEAEKRLRKILEEFKKKEEDIGIYLIKNLDATNKKAKIVGKC
PKCGGDLILIRHKKGRFVGCSNYPECDVKYSLPDKGRIKIPNKVCDACKSPILKIGDREI
CINPECPLKQVEVKEEDRICPKCGAKLILKKGVYGAFYGCSNYPKCKYTEPINKKEVVGK
CPKCGGDLVVREGKFGKFVGCSNYPKCRYTEKLKLNEKEEK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaattatgacagcgttaataatctgtgaaaaaccaagtgttgccaaaaagata
gcaaacgctttaggaaaagctaagaaaaaaagcattgatggagttccatactatgaatta
gaaagagatgggaaaaaaattatagtagcaagtgctgttgggcatctatttaccttagtt
gaaaaagagaataaagaatttggcttttatccagtatttgatataaaatgggtgcctgca
agtgttgataagggaaaagagtatgtaaataaatacataaaggcattaaaaaaactatca
aaagatgcagatgagttctatatagcaacagattgggacattgaaggggagctaataggt
tatcacgcattaaaatattgttgtggaagagaaaaggcaaagagaatgagattctcatca
ttaacaaaaaaagagatagttagagcatttgaaaatccggatgagattgattacggctta
gttgatgcaggagagagcaggcatattttagattggtattttggtataaacctatcgaga
gctttgatgaacgccataagggcagtgaatagatggaaaacgatgagtgttggaagagtt
caaggtcctgcattagcttttttaactgaaagagaattggaaattaaaaaatttatccca
aagccgtattgggttattgaggcactattaaaagataatttaaaggcaatacacgagaaa
gagaaattttggaatgaaaaagaggcaaaaaatgtttatgaaaaaataaaagatgaaaaa
tctgccaaagttgttgaaataaagaaaacaaaaagaaagttaaagccacttccacctttt
gacttaggaactctacagagagaggcatatagttattttaaaatatctccaaaggaaacg
caagaaattgcccaaaagctttatgagaatgctctaattagctatccgagaacatccagc
caaaaacttccaaaagatagaaagtatttggaagatattctaaatataataaaaaatcat
ccagtttatggaaaatgggcagagagaattttaaaagagaatttaaaaccagttgaagga
aagaaagaagaccctgcacatccagctatacacattgtagatattccaaaggaagaactt
tcagaaaaagagaaggagatttatgatttaattgcaagaagaactttagctgctttttgg
gataatgcagagagggaatatttaaatgtaaaaattgacattaaaggagagaagtttaag
ttatctggttcaaggacagtaaaagaaggatggcatgaaatttattacttcccaaaattt
gatgagattgaattgcccccattaaagaaaaatgacataattaaagttgaaaagataaca
ataacaagaaaagaaacgcaaccaccaaaaagatacactgttgcaagcataattaaggaa
ttagagaaaagagggctgggaacaaaagccactagggcagagatcatagacaaattaata
aaaaggggctatgtcattgatgatggttctttaaaagtaactgacttaggaatttcagta
atcgagacattaaaaagattctgcccagaaattatcgatgaaaagatgacaagggattta
gaggaaaagttggagaaaatacagtttagaaaaattaaaaaggatgatgttttagatgag
gctgaaaaaagattaagaaaaatattggaagaatttaaaaagaaagaggaagatattgga
atctaccttatcaaaaacttagatgccacaaataaaaaagcaaaaattgttggaaaatgt
cctaaatgtggaggagacttaattttaataagacataaaaagggcaggtttgttggctgc
tctaactatcctgaatgtgatgtaaaatactccttaccagataaaggtaggataaaaatt
ccaaacaaagtttgtgatgcatgtaaatcacctattttaaaaataggagatagagagata
tgcataaatccagaatgtcctttaaaacaagtagaggttaaagaagaagataggatttgc
ccaaagtgcggagctaagctaattttaaagaaaggagtttatggagcattttatggttgt
tcaaactatccaaagtgtaaatatacagaaccaataaataaaaaagaagttgtaggaaaa
tgccctaaatgtggaggagatttagttgttagagaaggtaagtttggaaagtttgttggt
tgctctaactatccaaagtgtagatatactgaaaaactaaaactaaatgaaaaagaagaa
aaataa
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