KEGG   Mycobacterium sp. JLS: Mjls_1780Help
Entry
Mjls_1780         CDS       T00482                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mjl  Mycobacterium sp. JLS
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mjl00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Mjls_1780
   03410 Base excision repair
    Mjls_1780
   03420 Nucleotide excision repair
    Mjls_1780
   03430 Mismatch repair
    Mjls_1780
Enzymes [BR:mjl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mjls_1780
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mjls_1780
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mjls_1780
DNA replication proteins [BR:mjl03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Mjls_1780
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Mjls_1780
DNA repair and recombination proteins [BR:mjl03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mjls_1780
   NER (nucleotide excision repair)
    Other NER factors
     Mjls_1780
   MMR (mismatch exicision repair)
    Other MMR factors
     Mjls_1780
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(1881712..1883274)
Genome map
AA seq 520 aa AA seqDB search
MLLVDVATASVDVGAMSSRLAKTARIADLLSRAGTEQDARLVAVTVAWLSGELPQRQIGV
GWAALRSLPAPAAAPTLTVTAVDAVFSEIGAVAGKGSQARRAGLIAELFAAATDVEQTFL
RRLLTGELRQGALIGVMADAVAKAADVPAARVRRAAMLAGDLPAVAAAVLAGGDAALARF
TLQVGRPVGPMLAQTATGVADALDRLGGTAVFEAKLDGARVQIHRRGSDVSVYTRSLDDV
TARLPEVVEAALALPVTDLIADAEAIALRPDGRPHRFQVTASRFGRAAARATQPLSVFMF
DLLHVDGADLLDQPTSDRVRVLDDLVPAAHRVDRLVTDDGAAAQRFLEATLAAGHEGVMA
KSPNAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPATGGFVM
LGKTFKGMTDAMLDWQTARFLELADPAAQPATSGRDPTDGHTVKVRPEQVVEIAFDGVQG
STRYPGGMALRFARVLRYRDDKSPAEADTVDTVRAFYEHG
NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt
gtgctgctcgtcgatgtcgccaccgcgtcggtcgacgtcggcgcgatgtcgtcgcggctg
gccaagacggccaggatcgccgatctgctgagccgcgcgggcaccgaacaggatgcccgg
ctcgtcgcggtgacggtggcgtggctgtccggtgaactcccccagcgccagatcggtgtc
ggctgggcggccttgcgttcgctcccggccccggccgccgcgcccacactgaccgtgacg
gcggtcgacgcggtgttctccgagatcggcgcggtggccggaaaaggttcgcaggcccgc
cgggcgggtctcatcgccgagttgttcgccgccgccaccgacgtcgagcagaccttcctg
cgccgcctgctgaccggggaactgcgtcagggggcgttgatcggggtgatggccgacgcc
gtcgccaaggccgccgatgtgcccgccgcccgggtgcgccgggcggcgatgctcgccggt
gacctgcccgcggtggccgccgctgtgctcgccggaggggacgccgcgctggcccggttc
accctgcaggtgggccggcccgtcgggccgatgctcgcccagaccgcaacgggagtcgcc
gacgcactggaccggttgggcggcacggcggtgttcgaggcgaaactcgacggcgcccgc
gtgcagatccaccgtcggggatcggacgtgtcggtgtacacccgatccctcgacgacgtc
accgcgcgcctgccggaggtcgtcgaggctgcgctcgcactgccggtcaccgacctgatc
gccgacgccgaggcgatcgcgctgcgcccggacggccgcccgcaccggttccaggtgacc
gcatcgcggttcggccgggcggcagcgcgcgccacgcagccgctgtcggtgttcatgttc
gacctgctgcacgtcgacggcgccgatctgctcgatcagccgaccagcgaccgggtgcgc
gtcctcgacgacctcgtgcccgcggcgcaccgcgtcgaccggctcgtcaccgacgacggc
gccgccgcgcagcggttcctggaggcgacgctcgccgccggacacgagggcgtgatggcg
aagtcaccgaacgcgccgtacgaagcgggccgccgcggggcgggctggttgaaggtcaaa
cccgtccacaccctcgatctggtcgtgctcgccgtcgaatggggcagcggcaggcgcacc
gggaagctgtccaacatccacctcggcgcccgcgaccccgcgaccgggggtttcgtcatg
ctgggcaagacgttcaaggggatgaccgacgcgatgctcgactggcagaccgcccggttc
ctcgaactggccgacccagccgcgcagccggcgacatccggccgcgatccgaccgacggc
cacaccgtcaaggtccggcccgaacaggtggtcgagatcgcgttcgacggcgtccagggt
tcgacgcggtatccgggcggcatggcattgcggttcgcccgcgtcctgcgctaccgcgac
gacaaatcgccggccgaggcggatacggtcgacaccgtccgtgccttctacgagcacggc
tga

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