Manis javanica (Malayan pangolin): 108397237
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Entry
108397237 CDS
T06054
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04151
PI3K-Akt signaling pathway
mjv04510
Focal adhesion
mjv04512
ECM-receptor interaction
mjv04820
Cytoskeleton in muscle cells
mjv04926
Relaxin signaling pathway
mjv04933
AGE-RAGE signaling pathway in diabetic complications
mjv04974
Protein digestion and absorption
mjv05146
Amoebiasis
mjv05165
Human papillomavirus infection
mjv05200
Pathways in cancer
mjv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108397237 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108397237 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108397237 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108397237 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108397237 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
108397237 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108397237 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
108397237 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108397237 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
108397237 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108397237 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjv04147
]
108397237 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
mjv00536
]
108397237 (COL4A3)
Exosome [BR:
mjv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108397237 (COL4A3)
Glycosaminoglycan binding proteins [BR:
mjv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108397237 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108397237
NCBI-ProteinID:
XP_036853737
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MRPGAALRPPALLLVFLAAVPAAGKVCVCKEKGQCFCDGSKGEKGEKGFPGPQGYPGQKG
FPGPEGLPGPQGPKGTPGRPGLTGPKGVRGITGLPGFSGPPGLPGTPGHPGPYGLAGLPG
CNGSKGEQGFPGLPGTPGYPGIPGAVGLKGEKGAPAGEGIERDGKGDPGLPGAPGFQGFP
GLLGFPGPVGPPGPPGFSGFPGTMGPPGPKGHMGDNVIGQKGERGVKGLTGPPGPPGTVI
VTLTGPENRTDLKGEKGDEGAVGKSGPPGPSGPPGESYQSEKGAPGEPGLQGKPGKDGAP
GFPGTEGAKGSKGFAGLRGEDGIKGWKGDTGPPGFRGPTDYYDVYQEKGDEGIPGPPGPR
GARGPQGPSGLPGFPGSPGSSRPGLRGAPGSPGMEGRKGERGPPGRNVAGPPGSPGCPGS
PGPIGSPGHPGPPGGIVFRKGPPGVGGSPGRVGSPGIPGVDGTKGEPGLLCTQCPCVPGS
PGLSGLPGLDGRKGIPGGQGAAGIKGSPGSAGSAGLPGFPGFPGAQGDPGLKGVKGEASQ
PEGQVGAPGDPGLRGSPGRRGLDGIPGAPGAKGLPGPKGEPALSGEKGDRGFPGDPGTPG
PPGPAGPAGPPNYGPQGEPGPKGTQGVPGVPGPPGEAGPKGEFSVSIPVAGPPGPPGPPG
RSGPQGPPGIPGSRGRCGDPGHPGPDGEPGIPGTGFPGPPGPKGDQGFPGTEGAPGCPGE
MGKPGLPGQPGLPGAKGEPGVAVHGAPGMPGFPGERGNSGEIGETGLPGLEGLPGIPGTG
GLDGPLGDPGQPGPPGEKGPPGRCTEGPRGAQGLPGLNGLKGQQGGRGTAGPKGDPGIPG
LDRSGFPGEPGLPGRPGHRGEMGPPGQKGYPGNTGFLGPPGEKGVVGMMGYPGNIGLPGP
PGNPGTPGQKGSFGIPGAKGQRGPPGAKGEEGDKGTPGPSQISQLLGDKGDPGLKGFPGN
PGEKGNRGIPGLPGLKGLEGPPGPPGPPGPRGDPGSTGKPGEPGPRGVPGSMGLMGVPGS
KGERGTLGLPGLTGRPGFPGTHGLQGEKGDPGYSEGTRPGPPGTKGDPGLPGDVGSKGER
GPPGAPGHLGPAGPEGIPGNPGSPGHPGKPGPGGDLGFKGIRGFPGSPGRKGPPGPPGFP
GSPGPMGMRGNQGHDGIPGPAGEKGETGFLGALPGPEGSPGPQGAKGDRGSPGLPGPPGG
KGTEGDIGPPGSTGMAGLPGPPGFPGAIIPGQKGSRGPPGLRGNPGEPGPPGPPGSHVKG
IKGDKGFMGKPGPSGPPGTVGDKGTSGHLGVPGTPGLPGLRGDPGFHGFPGITGEKGNPG
FLGPVGPPGRIGPKGRPGVRGDPGTVTIISLPGSPGPPGPAGEPGMQGERGLPGPPGSPG
PCGPRGKPGKDGKPGTPGRIGEKGNKGCKGEQGPPGLDGRPGLKGKPGDTGPPATGTTMR
GFIFARHSQTTEIPSCPKGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQQFTTMPFLF
CNINDVCNFASRNDYSYWLSTPALMPRDMAPITGRALEPYISRCTVCDGPSIAIAIHSQT
TDIPSCPHGWISLWRGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRGTCNY
YSNSYSFWLASLNPKRMFRKPIPSTVKAGELEKIISRCQVCMKRRH
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccggggcggcgctgaggcccccagcgctcctgctggtgttcctggcggccgtg
cccgccgcgggcaaggtctgtgtctgtaaagagaaaggccagtgcttctgtgatgggagc
aaaggggagaagggcgagaaaggctttcctggaccccagggttatcctggccagaaggga
ttcccaggtcctgaaggcttgcctggaccacaggggcccaagggcactccaggacgccca
ggactcactggtcccaaaggtgtaaggggaataactggattaccgggattttcaggtcct
cctggacttccaggcaccccaggccatcctggaccttatggacttgccggtttgccagga
tgcaatggctctaagggtgaacaagggtttccaggcctcccaggcacaccgggctaccca
gggatcccgggtgctgttggtctgaaaggagaaaagggtgctcctgctggagaaggtata
gaacgtgacggaaaaggtgaccccggattgccaggagcaccaggattccagggttttccc
ggccttctgggttttcctggacctgttggtccacctggccctccaggattctctggcttt
ccaggaaccatgggacctccgggacctaagggtcacatgggtgataacgtgataggacaa
aaaggagagaggggtgtgaaaggattaacaggaccacctggaccaccaggaacagttatc
gtgacactaacgggcccggagaacagaacggacctcaagggggagaagggagacgaggga
gccgtgggaaaatccggacctcctgggccctcgggaccacctggcgaatcttaccaatct
gagaaaggtgcccctggagaacctggcctgcagggaaaaccaggaaaagacggtgcccct
ggtttcccaggcactgagggagccaaaggcagcaagggcttcgctgggctcaggggtgaa
gatggcattaaggggtggaaaggggacactggccctccaggatttcgtggtccaacagac
tattatgatgtgtaccaggaaaagggagatgaaggaattccaggcccaccagggcccaga
ggagctcgtggcccacagggccccagtggtctccctggatttcctggaagtcctgggtca
tcaaggcctggcctcagaggagcgcctggatcacccggcatggaaggaaggaaaggggaa
cgaggacccccgggaaggaacgtagctgggcctcctgggtccccgggctgtcctggttca
ccaggccctatagggtcaccaggacatccaggaccgccaggtggcatcgtttttcgcaaa
ggtccacctggagttggtggatctccaggccgtgtagggtctccaggaatcccaggagtc
gatgggactaaaggggaaccaggccttctgtgcacacagtgtccttgtgtcccagggtct
ccaggtctctcaggattgccagggttagatggcagaaaaggaatcccaggaggacaaggg
gcagctggcattaaaggaagcccagggtccgcaggaagtgcaggtcttccaggatttccg
ggattccccggtgctcagggtgatccaggactcaaaggagttaaaggtgaagcatcacag
ccagagggacaagtgggtgccccaggggacccggggctcagagggagtcctggaagaagg
ggcttagacggaattcctggagctccgggggcaaaaggattaccaggacctaaaggtgaa
ccggccctgagtggtgagaagggggaccggggtttcccaggggatcctggcacccctggg
cccccaggacctgcgggaccagctggaccacccaactatggaccacagggcgagcctggt
ccaaagggcacccaaggagttcctggagtccctggaccacctggagaagccggtcctaag
ggagaattcagtgtttcaataccagtcgcagggcccccaggacccccaggacctcctggc
cgctccggcccccaaggtcctcctggtatccccgggtccagaggaaggtgtggtgatcca
ggtcatcctgggcctgatggtgaaccaggaattccaggaactggatttcctgggcctcct
ggacctaagggagaccagggtttcccaggaacagaaggagcaccgggttgtcctggagaa
atgggaaagcctgggttacctggacagccaggcctcccaggggccaagggagaaccagga
gtagccgtgcacggagccccaggaatgccaggttttccgggagaaagaggcaattctggg
gaaattggagaaactggactccctggacttgaaggtctccctggaattccaggaactgga
gggcttgatggaccgctaggggatccagggcagcctggaccacctggggaaaaaggaccc
ccaggaaggtgcacagagggtcccaggggagcccaaggacttccaggcttaaacggattg
aaagggcaacaaggcggaagaggcacagcaggcccaaagggagatcccggtattccaggc
ttggataggtcaggatttcctggtgaacctggactaccaggaaggccaggtcatcgaggt
gagatgggtccacctggtcaaaaaggatatccaggaaacacaggatttttaggaccacca
ggtgaaaaaggagtggttggaatgatgggctatcctggaaacattggccttccggggcct
cctgggaacccaggcaccccagggcagaagggtagttttggaattccaggagcaaaaggc
cagagaggaccccccggagccaaaggggaagaaggggataaaggcactcctgggccttct
caaatatcccagcttctcggggacaaaggggacccaggcctcaaaggatttccaggaaac
ccaggtgagaaaggaaacagaggtattcctgggttaccaggtttaaaaggacttgaaggg
ccacctggaccaccaggaccaccaggccccagaggagatccgggcagcactgggaagcct
ggagaaccagggccacgtggtgtgccaggaagcatgggcctcatgggggtgccaggttcc
aaaggagagaggggaactttgggactcccaggtctaacaggaagaccaggcttcccaggt
actcatggtctccaaggagaaaagggagacccaggttattcagaaggtacacggccagga
ccaccaggaacaaagggagacccaggattgccaggtgacgtgggaagtaaaggagaaaga
gggccacctggtgcacctggccatctggggcctgccggacctgaggggatccctggaaat
cctggaagtcctggccatccaggaaagccgggtcctggtggtgatttgggctttaaagga
atcagaggcttccctggctctccaggaagaaaagggcctccaggacctccaggattccca
gggtctccgggaccaatgggtatgagagggaaccaaggacatgatggaattcctggtcca
gcaggagaaaagggggaaacaggtttcctaggggcacttccaggcccagaagggagccct
ggtcctcaaggagccaaaggggacaggggatccccaggcttgcccggcccccccggcggg
aaaggcacagagggagacattgggccaccgggatccactggcatggcagggctcccagga
ccacccggtttccctggcgcaatcatccctggccaaaaaggaagtcgaggtccaccgggc
ttgagaggaaacccaggggagcctggtccccctggacctccagggagtcatgtaaaaggc
ataaaaggagataaaggatttatgggcaagcctggcccaagtggtccacctggaactgtg
ggagacaaggggacatccggtcatctgggagtaccaggcaccccaggtctgccagggctc
agaggtgatcctggattccatggatttccaggcataacaggagaaaagggtaatccagga
tttctgggaccagttggacctcccgggcgaattggacccaaaggacgacctggtgtacgt
ggagatcctggcacagtgacaatcatctcccttccaggaagcccagggccacctggccca
gctggagagccagggatgcaaggagaacgtgggctcccagggccgccaggaagcccagga
ccctgtgggccaagaggtaaaccaggcaaggacggaaaaccaggaactcctggtcgaatt
ggagaaaaaggcaacaaaggctgcaaaggagagcaaggaccacctggattggatggacga
ccaggtttgaaggggaaacctggagacactggaccccctgcaacagggacaacgatgaga
ggctttattttcgctcggcatagtcagaccacagagattccttcctgtcctaaagggaca
gagccactctatagtgggttttcccttctttttgttcaaggaaatgaacaagcccatgga
caagacctgggaactcttggcagctgcctgcagcagtttaccacaatgccattcttattc
tgtaacatcaatgatgtatgcaatttcgcatctcgaaatgattactcatactggctgtcg
acaccagctctgatgccaagggacatggctccaattactggcagggccctggagccatac
attagcagatgtactgtctgtgacggtccctcgattgccatagccatccacagccaaacc
actgacattccctcatgtccccatggctggatttcactctggagaggattttctttcatc
atgtttacaagtgcaggttctgagggcgctgggcaagcgctggcatcacctggatcctgc
ttggaggaattccgagccagtccattcatagaatgtcatggaagaggaacatgcaactac
tattcaaattcctacagtttctggctggcttcattaaaccccaaaagaatgttcagaaaa
cctattccatccactgtgaaagctggggagttggaaaagataataagtcgctgtcaggtg
tgcatgaagagaagacactga
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integrated database retrieval system
