Microvirga lotononidis: U0023_09625
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Entry
U0023_09625 CDS
T09656
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mld03009
]
U0023_09625 (rsmB)
Enzymes [BR:
mld01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
U0023_09625 (rsmB)
Ribosome biogenesis [BR:
mld03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
U0023_09625 (rsmB)
BRITE hierarchy
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
FtsJ
MTS
Methyltransf_23
ADH_zinc_N
adh_short
Cons_hypoth95
Methyltransf_15
ApbA
NCE101
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
WQO29297
LinkDB
All DBs
Position
2025725..2027038
Genome browser
AA seq
437 aa
AA seq
DB search
MSEQAGLGPRRLAWMAVTETLKRRVPLDDVMEDLSRTENLSARDEALARAIAIVTFRRLG
TLGHALRERLNKPPKDERLMHLLAIGAAQILFLDVPDHAAVDSAVELAQGDPKLHHAGGF
INAVLRRVAREREQILAENDPWLDTPTWLEERWIAQYGEPLATKIAEAHRSLASVDLTVK
REPEAWAERLGGVLLPTGSIRLKERTAIRELPGFEDGEWWVQDAAAALPARLLQAQPGER
IADLCAAPGGKTAQLAAAGAEVLAVDRSAKRLERLEENLARLGLKAETRALDAEKLDAEP
FDAILLDAPCSATGTIRRHPDVAWTKSEEDIRKLSGLQSRLLDKAARLLKPGGRLVYCTC
SLEAEEGERQAEAFLARHPDFTRKPIAADEIGGLTECITPHGDLRTLPSQLTLTEHDRSG
LDGFFVARFMHKGSSTG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaggcgggcctagggccccgccgcctggcctggatggcggtgaccgagacc
ctgaagcggcgcgtgccgctcgacgacgtcatggaggatctgtcccggacggaaaacctc
tcggcccgcgacgaggcgctcgcccgcgccatcgccatcgtgaccttccggcgtctgggc
accctcggacatgcgctgcgcgaacggctcaacaagccgcccaaggacgagcgcctgatg
catctcctcgccatcggggcggcgcagatcctgttcctcgacgtgccggaccatgcggcc
gtcgacagcgccgtggaactcgcccagggcgaccccaagcttcatcacgccggcgggttc
atcaacgcggtcctgcgccgggtcgcccgggagcgcgaacagatcctcgccgagaacgat
ccctggctcgacacgcccacctggctcgaggagcgctggatcgcgcaatacggcgagccg
ctggcgacgaaaatcgccgaagcgcatcggtcgctcgcctccgtcgacctaacggtgaag
agggagccggaagcctgggccgagcgcctcgggggcgttctcctgcccaccggcagcatc
cgcctcaaggagcgcactgccatccgcgagctgcccggcttcgaggacggcgaatggtgg
gtgcaagatgcggccgcggccctcccggcccggctgctccaggcgcagcccggcgagcgc
atcgccgacctctgcgccgcgcccggcggcaagaccgcgcagctggccgctgccggcgcc
gaggttctcgccgtcgaccgctcggcgaagcggcttgagcggctggaggagaacctcgcc
cgcctgggcctcaaggccgagacccgtgcgctcgacgcggaaaagctcgatgcggagccc
ttcgacgccatcctgctcgatgccccatgctcggccaccggcaccatccggcgccatccg
gacgtggcctggaccaagagcgaggaggacatccgcaagctctcggggcttcagtcgcgc
ctgctcgacaaggcggcgagactgctgaagcccggcggacggctggtctattgcacctgc
tcactggaagccgaggaaggcgagcgtcaggcggaggctttcctcgcccgccatcccgac
ttcacccgcaagcccatcgcagccgacgagatcggcggcctgaccgagtgcatcaccccg
cacggcgaccttcgcaccctgccgagccaattgacccttacggaacatgaccggagcggc
ctcgacggcttctttgtcgcacggtttatgcacaagggatcgtcaacagggtga
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