Mycolicibacterium litorale: B1R94_23495
Help
Entry
B1R94_23495 CDS
T05032
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mll
Mycolicibacterium litorale
Pathway
mll03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
B1R94_23495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mll03400
]
B1R94_23495
Enzymes [BR:
mll01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
B1R94_23495
DNA repair and recombination proteins [BR:
mll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
B1R94_23495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_C
DNA_ligase_A_M
RNA_ligase
DNA_primase_S
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AQT81584
LinkDB
All DBs
Position
complement(4947465..4949744)
Genome browser
AA seq
759 aa
AA seq
DB search
MVNEVWPPGATRGPRVVLTNADKVLYPATGTTKSDVFSYYTTIAEVMVPHIAGRAVTRKR
WPNGVDEPSFFEKQLASSAPGWLERATVQHRSGSTTYPIIDTPTGLAWIAQQAALEVHVP
QWRFTPDGKPGPATRLVFDLDPGDGVTMPQLGEVANAVRELMEDIGLTVYPLTSGSKGLH
LYAPLADPVSSNGAVVLARRVAQQLEKSMPALVTATMTKSLRAGKVFLDWSQNNGSKTTI
APYSLRGREQPTVAAPRTWEEIGDPELRHLEYHEVLARVAEQGDLLAGLDDDVPRFDRLS
TYRSMRDSAKTPEPVPAAKPAVGENNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLP
DTPAVNHLAVHTEDHPLEYATFSGEIPKGEYGGGKVVIWDSGTYEAEKFRDSGDKGGEVI
VDLHGQRISGRYALIQTKGDQWLAHRMKEQPTPRLQDYAPMLATLGSVEKLTAAQYAFEG
KFDGYRLLVEVDHGRLRAQSRSGRDLTGDYPQLQLLAADLADHEVILDGEVVALDADGVP
SFGEMQNRVRATRIEFWAFDILRLDGRSLLKAKYRDRRRVLETFAEGTDLIVPPLLDGDG
SEALACSQKKKWEGVVAKKWDSTYQPGRRSAAWIKDKNWNTQEVVIGGWREGNGGRSSGI
GALVLGIPDGGGLRFVGRVGTGFSEKELTRLKKILAPLHTDESPFAAALPRIDAKGVTYV
RPELVGEVRYSEWTSDGRLRHPSWRGLRPDKVPADVEWE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgaggtgtggccgccgggcgcgacgcggggaccgcgggttgtgctgaccaac
gccgacaaggtgctctatccggccaccggcaccaccaaatccgacgtgttctcgtactac
accaccatcgccgaggtgatggtgccgcacatcgccggccgtgcggtgacgcgcaaacgc
tggcccaacggagtcgacgagccgtccttcttcgaaaagcagttggccagttcggcgccg
ggctggctggagcgcgcgacggtgcagcaccgttcgggcagcaccacctatccgatcatc
gacacccccaccgggctggcctggatcgcccaacaggccgcgctggaagtccatgtgccg
cagtggcgtttcacgccggacggaaagcccggtccggcaactcgtttggtgttcgatctg
gaccccggcgacggtgtgacgatgccccaactgggtgaggtggccaacgccgtacgcgaa
ctcatggaggacatcgggctgacggtgtacccgttgaccagcggcagcaaaggcctgcac
ctctatgcgccactggccgatccggtgagtagcaacggggcggtggtgctggcccggcgg
gtcgcccagcagctggagaaaagcatgcccgcgctggtcacggcgacgatgaccaagagc
ctgcgggcgggcaaggtgttcctggactggagccagaacaacggatccaagaccacgatc
gcgccgtattcgctgcgaggccgggagcagccgacggtcgccgcgccgcgcacgtgggag
gagatcggcgaccccgaactgcggcacctggagtaccacgaagtgctggcccgggttgcc
gagcagggcgatctcctggccgggctggacgacgatgtgccgcggtttgaccgcctgagc
acctatcgcagcatgcgcgattcggccaagaccccggagccggtgcctgctgccaagccc
gcggtcggagagaacaacacgttcgtcatccaggagcatcacgctcgccggctgcactac
gacttccggttggagcgcgacggggtgctggtgtcgtgggcggtgcccaagaatctgccg
gataccccggcggtcaaccatctggccgtgcacaccgaggaccatccgctggagtacgcg
acgttctccggtgagatccccaagggggagtacggcggcggcaaggtggtcatctgggat
tcgggcacctacgaggcggagaagttccgggactccggcgacaagggcggcgaggtgatc
gtcgacctgcacggccagcgaatctccggacgctatgcgttgattcagaccaagggcgac
cagtggctggcgcaccggatgaaggaacagcccactccgcgtctgcaggactatgcaccg
atgctggccaccctgggttcggtcgagaagctgaccgcagcgcaatacgcgttcgagggc
aagttcgacgggtatcgactgctggtcgaggtcgaccacggccggctgcgggcccagtcc
cgcagcggacgcgacctgaccggcgactacccgcaactacagttgctggccgccgatctc
gccgaccacgaggtcattctggacggcgaggtggtggcgctcgatgccgacggggtgccg
agcttcggggagatgcagaaccgggtgcgcgcaactcgaatcgagttctgggcgttcgac
attctgcggctcgatgggcgttcactgctgaaggcgaaataccgcgaccggcggcgcgtg
ctggaaaccttcgccgagggaaccgatttgatcgtgccgccgctgctcgacggtgacggc
tccgaagcgctggcgtgctcgcagaagaagaagtgggagggcgtagtcgccaagaaatgg
gactcgacctaccagccgggccggcgctcggcggcgtggatcaaggacaagaactggaac
acccaggaagtggtcatcggcggctggcgcgagggcaacggcggacgatccagcggcatc
ggcgcgctggtgctggggatacccgatgggggcgggctgcgattcgtcggccgagtcggc
accggcttctcggagaaagaactgacccggctcaagaagatcctcgcaccgctgcatacc
gacgaatccccctttgccgcagcgcttcccaggatcgacgccaagggcgtcacctatgtt
cgtccggagttggtgggcgaggtgcgctacagcgaatggacttcggacggtcggctgcgc
cacccgagctggcgtggccttcggcccgacaaagtgccggccgacgtggaatgggaataa
DBGET
integrated database retrieval system
