Mirounga leonina (Southern elephant seal): 117998623
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Entry
117998623 CDS
T07472
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross-complementing protein 6 isoform X1
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117998623 (XRCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlx03041
]
117998623 (XRCC6)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
117998623 (XRCC6)
Spliceosome [BR:
mlx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117998623 (XRCC6)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
117998623 (XRCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
SAP30_Sin3_bdg
NpwBP
Motif
Other DBs
NCBI-GeneID:
117998623
NCBI-ProteinID:
XP_034843289
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MSGWESYYKNEGDEEEEQEEGLEAGGEYTYSGRDSLIFLVDGSRAMFESQGEVELTPFDM
SIQCIHSVYTNKIISSDQDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRVLELDQF
KGEQGKKHFQDLIGHGSDYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHGNDSAK
ASRARTKAGDLRDTGIFLDLMHLRKRGGFDISLFYRDIISTAEDEDLGVHFEESSKLEDL
LRKVRAKETRKRVLCRLKLKLSKDIALTVGMYNMVQKAVKPPPVRLYRETNEPVKSKTRT
FNVNTGSLLLPNDTKRSQNYGSRQIVLEKEETEELKRFDEPGLILIGFKPLILLKKHHYL
RPSLFVYPEESLVNGSSTLFSALLTKCLEKEVMAVCRYTPRRNIPPYFVALLPQEEELDE
QKIQVTPPGFQLVFLPYADDKRKVPFTEKVMANPEQIDKMKAIVQKLRFNYRSDSFENPV
LQQHFRNLEALALDLMEPEQAVDLTQISCSCCVGLGECSWPPSEPPPLHWLSRHPHSVLP
KIEAIDKRLGSLVNEFKELVYPPDYNPEGKVPKRKQDDEGSGSKRPKMELSEEDLKAHVS
KGTLGKLTVPVLKEACRVYGLRGGLKKQELLDTLTKHFQN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttgggagtcttattacaaaaacgagggcgatgaagaagaagaacaagaagag
ggccttgaagcaggtggagaatatacatattcgggaagagatagtttgatttttttggtt
gatggttctagggccatgtttgaatctcagggtgaagttgaactgactccttttgacatg
agcatccagtgtatccacagtgtgtataccaataagatcataagcagtgatcaagatctc
ttggcagtggtgttctatggtactgagaaggataaaaattcagtgaatttcaaaaatatt
tacgtcttacaggagttggataatccaggtgctaaacgagtgcttgagcttgaccagttt
aaaggggagcaggggaaaaaacatttccaagacctgattggccatggatctgactactca
ctaagtgaagtgctgtgggtctgtgccaacctgtttagcgatgtccaggtcaagatgagc
cataagaggatcatgctgttcaccaatgaagatgacccccatggcaatgacagtgccaaa
gccagccgggccaggaccaaagctggggatctccgtgacacaggtatcttcctggacttg
atgcacctgaggaaacgtgggggctttgacatatccttgttttaccgagatatcatcagc
acagccgaggatgaggatctaggggttcactttgaggaatccagcaaactggaagacctg
ttgaggaaggttcgtgccaaggagaccaggaagcgcgtgctctgcaggttgaagcttaag
ctcagcaaagatatagcactcactgtcggcatgtataatatggtccagaaggctgtcaaa
cctcctcctgtgaggctttatcgggaaaccaatgaaccagtgaaatccaagacccggacg
tttaatgtaaatacgggcagtttgcttctgcctaacgacaccaagaggtctcagaactat
gggagtcgtcagattgtactagagaaagaggaaacagaagagctgaaacgctttgatgaa
ccaggtttgattctcatcggtttcaagcccttgatattgctgaagaagcaccattacctg
aggccctccctgttcgtgtaccccgaagagtccctggtgaatgggagctcaaccctgttc
agtgctctcctcaccaagtgtctggagaaggaagtcatggcagtgtgcagatacaccccc
cgtcggaacatccctccttattttgtggccttgttgccacaggaagaggagctagatgag
cagaaaattcaggtgactcccccaggcttccagcttgtcttcttaccctacgctgatgat
aaacggaaggtgccctttaccgaaaaagtcatggcgaacccagagcagatagacaagatg
aaggctattgttcagaagctccgtttcaactacagaagtgacagcttcgagaacccagtg
ctgcagcaacacttcaggaacctggaggcgctggctttggacctcatggagcccgagcaa
gcggtggatctgacacagatatcttgttcctgttgtgttggtcttggcgaatgttcctgg
cctcccagcgagccaccacctctccactggctgtcccgacacccacattccgtcttgcct
aaaattgaagcaatagataaaagactgggctccctggtgaatgagtttaaggagcttgtc
tacccaccggattataatcctgaaggaaaagttcccaagcggaaacaagatgatgaaggt
tctggcagcaaaaggcccaagatggagttatctgaagaggatctgaaggcccatgtgagc
aagggcacgctgggtaagctcactgtgcccgtgctgaaggaagcctgcagggtgtacggg
ctgaggggtgggttgaagaagcaggagctgctggacacactcactaagcacttccagaac
tga
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