Mirounga leonina (Southern elephant seal): 118009237
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Entry
118009237 CDS
T07472
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04151
PI3K-Akt signaling pathway
mlx04510
Focal adhesion
mlx04512
ECM-receptor interaction
mlx04820
Cytoskeleton in muscle cells
mlx04926
Relaxin signaling pathway
mlx04933
AGE-RAGE signaling pathway in diabetic complications
mlx04974
Protein digestion and absorption
mlx05146
Amoebiasis
mlx05165
Human papillomavirus infection
mlx05200
Pathways in cancer
mlx05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118009237 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118009237 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118009237 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118009237 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
118009237 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
118009237 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118009237 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
118009237 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118009237 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
118009237 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118009237 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlx04147
]
118009237 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118009237 (COL4A1)
Exosome [BR:
mlx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118009237 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118009237 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118009237
NCBI-ProteinID:
XP_034858945
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGP
PGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGLGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGDAGYPGLPGREGFRGDKGEAGPPGPPGIAIGPGPSGEKGERGYPGAPGLRGEPGP
KGFPGLQGQPGPPGFPVPGQAGAPGFPGERGEKGDQGFPGTSLPGPSGRDGQPGPPGLPG
PPGQPGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLICDTEGLRGPPG
PQGPPGEIGFPGQPGPKGDRGLPGRDGLEGLPGPQGTPGLMGQPGAKGEPGEIYFDARLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI
GPPGPPGFGPIGPVGDKGQAGFPGTPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFS
GPQGDRGFPGTPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG
LPGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGAGVPGEHGAIGPPGLQGI
RGDPGPPGLQGPKGAPGAPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG
LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQTG
PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQVGLPGIGIPGRPGDKGDQGVAGFPGSPGE
KGEKGSAGIPGVPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGS
PGPTGPAGQKGEPGSDGIPGSAGEKGEAGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPG
LDGLKGDKGNPGWPGTPGVPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGVKGDQGDQGFPGSKGLPGPPGPPGPYDVIKGEPGLPGPEGPAGLKGLPGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctgggcgtctggctgcttctgctgcccgccgccctcctgctccacgag
gagcgcagccgggccgcggcgaagggtggttgtgctggctctggctgtgggaagtgtgac
tgccatggagtgaagggacagaagggcgaaagaggcctcccagggttgcaaggtgtcatc
gggtttcccgggatgcaaggacccgaggggccgcagggacctccaggacaaaagggtgac
actggagaacccgggctgcctggaacgaaaggaacaagaggaccccctggagcatcgggt
taccctggaaacccaggactgcctggtattcctggccaagacggtccccctggtcctcca
ggtatccccggatgcaatggaacaaagggcgagccagggcctctggggcccccgggtttg
cctggattcgctggaaatcctggacctccaggattaccaggaatgaagggggatccaggt
gaaatcattggccatgtgcctgggaccctgttgaaaggtgaaagaggatttcctggaccc
ccaggaacaccaggctcgccaggactgccaggcctgcaaggtcctgttggccctccagga
tttaccggaccaccaggtcctccaggccctcctggccctccaggtgaaaaggggcaaatg
ggcttaagttttcaagggccaaaaggcgacaagggtgaccagggggtcagtgggcctccg
ggagtgccaggacaagctcaagttcaagaaaaaggagactttgccactaaaggagagaag
ggtcaaaaaggcgaacctggatttcagggaatgccagggcttggagagaaaggggagcct
ggaaaaccagggccccgaggaaaacctggaaaagatggcgaaaaaggagaaaaagggagt
ccaggcttcccaggcgacgcggggtacccgggacttccaggccgcgaaggtttcagggga
gacaaaggtgaagcaggtcctccaggcccacctggaattgccatcggcccaggaccctcc
ggagagaaaggagagcgggggtacccgggcgccccagggttgagaggagagccaggcccc
aaagggttcccaggattacaaggccagccaggtcctccaggcttcccggtaccagggcag
gcgggtgctcctggctttcctggtgaaagaggcgagaaaggtgaccaagggtttccaggc
acctctttgccaggaccgagtggaagagatgggcaaccgggcccccccgggcttcccggg
ccccctggacagccaggccacacgaatggaattgtggaatgtcagcctggaccgcctggg
gatcagggtccccctggaattccggggcagccagggctcacgggcgaggttggagaaaaa
ggtcagaaaggagacagctgcctcatctgtgacacagaaggacttcgtgggccccctggg
ccgcagggccccccaggagaaataggtttcccaggacagccagggccgaagggcgacaga
ggcttacccggcagagatggtctggaaggattgcctggcccgcaaggcacaccagggctg
atgggccagccgggagccaagggagagcctggcgagatttacttcgacgcacggctcaaa
ggagacaaaggagacccaggctttccaggacagcctgggatgccaggcagagcagggtct
cctgggagagatggccatccgggtctgcccggccccaaaggctccccgggttcagtagga
ttgaaaggagagcgtggaccccctgggggagttggattccccggcagtcgaggtgacatc
ggccctcctgggcctccagggtttggccctattggccctgttggtgacaaaggacaagcg
ggttttccggggacccctggatccccaggccagccaggtcccaagggtgaagcaggaaaa
gttgtgcccctacctggtccccctggagcacaaggacttccaggatccccaggcttctca
gggccacaaggtgaccgaggttttcctggaaccccaggaaggccaggcctcccgggagag
aagggcactgtcggccagcccggaatcggatttccagggccccccggccccaaaggtgtt
gatggcttacctggagacgtgggacctcctgggagtccgggtcgcccgggatttaacggc
ttacctggcaacccgggtgtgcccggccaaaagggagagccgggcattggtctaccagga
ctcaaaggattgccgggtcttcccggcattcccggcacacctggagagaaggggaacatc
ggaggagcaggcgttcctggagagcatggtgctatcggccccccaggccttcagggaatc
agaggtgacccaggaccgcctggattacaaggtcccaaaggagctccgggagctcctgga
attggcccccccggagcgatgggcccccctggaggacagggaccaccaggatcctcaggc
cctcctggagtgaaaggagagaagggctttcccggatttccaggcctggacatgccaggt
cccaaaggagataaagggtcccaagggctgcctggcctgacgggacagtcggggctccct
ggtctccctggacagcagggcacacctggggttcctgggtttccaggtcccaagggagag
atgggcgtcatggggaccccggggcagcctggctcaccgggaccagcgggcctgccagga
ttaccaggagagaaaggggaccacggcttcccgggctcctcggggcccaggggagaccct
ggcttcaagggggacaaaggagatgtgggtctccccggcaagcctggctccatggataag
gtggacatgggcagcatgaagggtcagaagggagaccaaggagagaaaggacagactgga
ccaactggtgataaaggatcccggggagaccctggaaccccgggagtacctggaaaggac
gggcaggcggggcatcctgggcagccaggacctaaaggtgacccaggcataggtggaacc
ccgggtgctccaggactccctggacccaaaggatcggttggtggcatgggcctgccagga
acaccgggagaaaaaggtgtgcctggaatccccggcccacagggcgtccctggcttaccc
ggggagaaaggagccaaaggagagaaagggcaggtgggcctacctggcattggaattccg
ggccgtcctggggacaagggagatcaaggggtcgcaggctttccggggagtcctggagag
aaaggagaaaaaggcagcgctggtatcccaggggtccctggctccccaggccccaaaggc
tcgccagggagtgtcggctatccaggaagccccggattgcctggagaaaaaggtgacaaa
ggtctcccgggatcggatggcattcctggcatcaaaggagaagcaggtcttcctgggagt
cctggccccacgggcccagctggccagaaaggggagcccggcagtgacggaatcccgggg
tcggcgggagagaagggtgaagcaggtctgcccgggagaggattcccagggtttccagga
gccaaaggagagaaaggttcaaagggtgacgtgggtttcccaggacaagccgggagtcca
ggcatccccggatccaaaggagagcaaggattcatgggtcccccggggccgcaaggacag
ccgggcttacctggagctccgggccacgctgtggaggggcccaaaggagaccggggccca
cagggtcagcctggcctgccagggcttccaggacctgtggggcctccggggctccctggg
cttgatggcctcaaaggtgacaaaggaaacccgggctggccggggactcccggagttcca
gggcccaagggagagccaggattccaaggcctgcctgggattggtggctcgccagggatc
acaggttctaagggtgacatggggcctccaggagtgccaggatttcaaggtcagaaaggc
ctccctggcctgcagggagtgaagggggatcaaggtgaccagggcttccccggaagtaaa
ggccttcccggccccccgggtcccccgggaccctacgatgtcatcaaaggggagccaggg
cttcctggtcctgagggtcccgcaggtctgaaggggctcccggggcctccaggccccaaa
ggacagcaaggtgtgacaggatccgtgggcttacctggaccgcccggtgttcctggtttt
gacggcgcccctggccagaaaggagagaccggacccttcggccctcctggtccgcgaggg
tttccgggcccgccaggccctgatggattgccaggatccatgggtcccccaggcaccccg
tctgttgatcacggcttccttgtgaccaggcacagtcagacaacggatgacccacagtgt
cctcctgggaccaaaattctttaccacgggtactccttgctctatgtgcaaggcaacgaa
agggcccacggccaggacttgggcacggctggaagctgcctgcgcaagttcagtacgatg
cccttccttttctgcaacatcaacaatgtgtgtaactttgcctcccgaaatgactactcc
tactggttgtccacgcctgagcccatgcccatgtccatggcgcccattgccggggacaat
atcagaccgtttattagcaggtgcgcagtgtgtgaggcgccagccatggtgatggccgtg
cacagccagaccattcagatcccgcagtgccccagcggctggtcctccctctggattggc
tattccttcgtgatgcacaccagtgctggtgctgaaggttcgggccaagccctcgcgtcc
cccgggtcttgtctggaagagtttaggagcgcgccattcatcgagtgccacggccgtggg
acctgcaactactacgcgaacgcttacagcttttggcttgccaccatcgagagaagcgag
atgttcaagaagcccacgccatccaccttgaaggccggggagctgcgcacacatgtcagt
cgctgccaagtctgtatgagaagaacgtaa
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