Mirounga leonina (Southern elephant seal): 118025212
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Entry
118025212 CDS
T07472
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03030
DNA replication
mlx03420
Nucleotide excision repair
mlx03430
Mismatch repair
mlx03440
Homologous recombination
mlx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118025212 (RPA1)
03420 Nucleotide excision repair
118025212 (RPA1)
03430 Mismatch repair
118025212 (RPA1)
03440 Homologous recombination
118025212 (RPA1)
03460 Fanconi anemia pathway
118025212 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlx03000
]
118025212 (RPA1)
03032 DNA replication proteins [BR:
mlx03032
]
118025212 (RPA1)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118025212 (RPA1)
Transcription factors [BR:
mlx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118025212 (RPA1)
DNA replication proteins [BR:
mlx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
118025212 (RPA1)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
118025212 (RPA1)
MMR (mismatch excision repair)
118025212 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
118025212 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
A_deaminase
Motif
Other DBs
NCBI-GeneID:
118025212
NCBI-ProteinID:
XP_034883456
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSEDGGGAYSYLAQKLWSAWGPVSEAEAAEKPERASWRGAVMVGHLSEGAIAVIMQQGDT
SIKPILQVINIRPIITGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCICQI
NRFIVNTLKDGRRVVILMELDILKSAEAVGLKIGNPVPYNEGHGQQQIVPSSGSAANPPA
NKLQQQNGSSAMGSTASKTYGASKTLGKAGGTSFVNSSGGTQVKVVPIASLTPYQSKWTI
CARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNEQVDKFFPLIDMNKVYYISK
GILKIANKQFTAVKNDYEMTFNNETSVMPCEHGHHLPTVQFDFTGISDLENKPKDSLIDI
IGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVTATLWGEDADRFDGSRQPVMAIK
GARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGRALDGVSISDLKSGGIGGSN
TNWKTLYEVKSENLGHGDKADYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYR
CEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAETIIGQNTAYLGELKEKNEQAFE
EVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYREYGRRLIMNIRRNALM
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagacgggggtggtgcctacagctacttggcgcaaaagctttggagcgcgtgg
ggtcccgtaagtgaagcagaggctgcggagaagccggagcgcgcgagttggcgcggcgca
gtcatggtgggccacctgagcgagggggccattgcggtcataatgcaacaaggagataca
tccataaaacccatcctccaagtcatcaacatccgtcccattattacagggaatagtcca
ccccgttatcgactgcttatgagtgatggattgaacactctctcctctttcatgttggca
acacagttgaaccctctggttgaggaggaacaattgtctagcaattgtatttgccagatt
aaccgattcattgttaacactctgaaagatggaaggagagtagttattttgatggagtta
gacattttgaaatctgctgaagcagttggattaaagattggcaatcctgtgccctataat
gaaggacatgggcagcagcagatagttccttcctcaggctcagcggccaacccaccagcc
aacaagctccagcagcagaatgggagctcagcaatgggttccactgcatctaagacttat
ggtgcctcaaagacacttggaaaagctggaggtaccagcttcgtgaacagttctggagga
acacaggtcaaagtggtacccattgccagcctcaccccttaccaatccaagtggactatc
tgtgctcgagttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaaggg
aagcttttctccatagaactagttgatgaaagtggtgaaatcagagctactgctttcaat
gagcaagtggacaagttctttccccttatcgacatgaacaaggtctattatatctctaaa
ggcatcctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgacc
ttcaacaatgagacttctgtcatgccctgtgaacatggtcatcatttacctacagttcag
tttgatttcacagggattagtgacctggagaacaagcctaaagactcacttatagacata
attgggatctgcaagagctacgaagatgccaccaaaatcacagtgaaatctaacaacaga
gaagtttctaagcgaaatatctatttgatggacatgtcagggaaagtggtcaccgctact
ctgtggggggaggatgctgatagatttgatggttctagacaacccgtgatggctatcaaa
ggagccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtc
attgtgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaagga
cgagccttagatggtgtttccatctctgatctaaagagtggaggaataggagggagcaac
accaactggaaaactttatatgaggttaaatcagagaacctgggccatggtgacaaggcc
gactattttagctctgtggcgaccgtcgtgtatcttcgcaaggagaactgtatgtatcag
gcctgcccaactcaggactgcaataagaaagtgattgaccaacagaatggattataccgc
tgtgaaaagtgtgacagtgaatttcccagcttcaagtaccgcatgatcctgtcagtaaat
attgctgattttcaagagaatcagtgggtcacttgtttccaagagtctgcagagaccatc
attggacaaaacactgcttatcttggggagttaaaagagaagaatgagcaagcatttgag
gaagttttccagaatgccaacttccgatctttcacattcaggatcagggtgaaactagag
acctacaatgacgagtctcgaattaaggccaccgtgatggacgtgaagcccgtggactac
agagaatatggcagaaggctgatcatgaacatcaggagaaacgcgctaatgtga
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