KEGG   Methanosarcina mazei Go1: MM_2714
Entry
MM_2714           CDS       T00082                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mma  Methanosarcina mazei Go1
Pathway
mma03030  DNA replication
mma03410  Base excision repair
mma03420  Nucleotide excision repair
mma03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MM_2714
   03410 Base excision repair
    MM_2714
   03420 Nucleotide excision repair
    MM_2714
   03430 Mismatch repair
    MM_2714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mma03032]
    MM_2714
   03400 DNA repair and recombination proteins [BR:mma03400]
    MM_2714
Enzymes [BR:mma01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MM_2714
    6.5.1.6  DNA ligase (ATP or NAD+)
     MM_2714
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MM_2714
DNA replication proteins [BR:mma03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MM_2714
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MM_2714
DNA repair and recombination proteins [BR:mma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MM_2714
   NER (nucleotide excision repair)
    Other NER factors
     MM_2714
   MMR (mismatch excision repair)
    Other MMR factors
     MM_2714
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase VP40
Other DBs
NCBI-ProteinID: AAM32410
UniProt: Q8PTK1
LinkDB
Position
3243731..3245437
AA seq 568 aa
MTSFREFAETCQAIEKISSTIETTNKVADLLKKVDVEELPVATHFIMSEVFPAWSGEQLG
IGTSLLYVSLSKASGMSIHSIESLVRTTGDIGDTALLILKEKRKNQVTFSSFFEEKPELS
ITEVYRRFKIASEASGKGSQDIKVKNLQFLFTSSSPREAKYISRLALEELRIGVGEGVVR
DAIAKAFSVPAEIVEHSFMVTNDLGIVAAAAKKGGVEALERLGIEINRPIKMMLSQISPD
IDADIRAMKEVAIEWKFDGARVQIHKDGNSVTLFSRKLENVTSSLPDLVEIVRKHVKAES
AILDGEAVAVDENGVPRAFQEILKRFRRKYDVREKALGIPIQLNFFDIMYINGKTLIDLP
LLERRKALESCVESSVEDSKSISVAEQVITGDLELVEKIYREALKAGHEGVMVKNPNSVY
SPGKRGKNWLKKKPLMDTLDLVIVGAEWGFGRRANLIGSYTVACYDPDTTRFLQVGKVGT
GLTDDQLKELTEILSGLMEGGEAGGVFAIRPKVVLEIAFEEIQKSPNYDSGFALRFPRFI
RIRDDKDPEEADTIQRIGRVYSQQLKRL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgacaagtttcagggaatttgcagaaacgtgccaggcaattgaaaaaatatcaagcact
atagagaccacaaataaggttgccgaccttctcaaaaaggttgatgttgaagagcttcct
gttgccactcattttattatgagtgaggtttttcctgcctggagtggggaacagctcggg
attggcacaagcctgctttacgtttctctttccaaagcctcaggcatgtccatacacagt
atagaatctcttgtccggacgaccggagatataggggatacagcactccttatccttaaa
gaaaaaagaaaaaatcaggtgacattctcttctttctttgaggaaaagccagagctatca
ataacagaggtttacaggcgtttcaagatcgcatcagaagcttctggaaaaggttcacag
gatattaaggtcaaaaacctccagtttctgttcacttcatcaagtcctagggaagcaaaa
tacatctcaaggcttgcgcttgaagaactcaggataggcgtgggagaaggagttgtcagg
gacgctattgcaaaagctttttctgttcctgcagagattgtggaacattccttcatggtt
acaaatgacctcggaatagtggctgcagcggctaaaaaaggaggggttgaagctctcgag
agactcgggatagaaattaaccgccctatcaagatgatgctttctcagatcagccctgac
atagatgctgatataagagccatgaaggaggttgcaattgaatggaaatttgatggggcc
agggtccagatccacaaggacggaaattccgtaactcttttttcgcgtaaacttgaaaat
gttaccagttccctccctgacctcgttgaaatagtccgaaaacatgtaaaagctgagtca
gcgatccttgacggagaagccgtagctgtggacgaaaatggggttccaagggcttttcag
gaaattctcaagcgtttcaggcgaaagtacgatgtcagggaaaaggcactcggaattcct
atccagctcaacttttttgacattatgtacatcaacggcaaaactttgatagatctcccg
cttctcgagaggaggaaagctcttgagtcctgtgttgagagttctgtcgaggactcaaag
tccatttccgtggctgagcaggtcataaccggagaccttgagcttgtggagaagatctac
agggaagccttaaaagccgggcatgaaggagttatggttaaaaacccgaattccgtttat
tctcctggaaaacgcggaaaaaactggctcaagaaaaaacctctcatggacactcttgac
cttgtaattgtcggagctgaatggggtttcgggcgcagggcaaacctgatcggctcttat
accgttgcctgttacgaccccgatactactcgcttcctgcaggtaggcaaggtcggcacg
gggcttacggacgatcagctaaaagagcttacggaaatactctcagggctaatggaaggc
ggagaagccggaggagtatttgctatcaggccaaaggttgtccttgaaatcgcttttgag
gaaatccagaaaagccccaactacgactcgggttttgcacttcgttttccccgtttcatc
cgcatccgtgacgataaagacccggaagaagcggatactatccagcggatagggcgcgta
tacagtcagcagctgaaaagactgtaa

DBGET integrated database retrieval system