KEGG   Methanosarcina mazei Go1: MM_2714Help
Entry
MM_2714           CDS       T00082                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mma  Methanosarcina mazei Go1
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mma00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    MM_2714
   03410 Base excision repair
    MM_2714
   03420 Nucleotide excision repair
    MM_2714
   03430 Mismatch repair
    MM_2714
Enzymes [BR:mma01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MM_2714
    6.5.1.6  DNA ligase (ATP or NAD+)
     MM_2714
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MM_2714
DNA replication proteins [BR:mma03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MM_2714
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MM_2714
DNA repair and recombination proteins [BR:mma03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MM_2714
   NER (nucleotide excision repair)
    Other NER factors
     MM_2714
   MMR (mismatch exicision repair)
    Other MMR factors
     MM_2714
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3243731..3245437
Genome map
AA seq 568 aa AA seqDB search
MTSFREFAETCQAIEKISSTIETTNKVADLLKKVDVEELPVATHFIMSEVFPAWSGEQLG
IGTSLLYVSLSKASGMSIHSIESLVRTTGDIGDTALLILKEKRKNQVTFSSFFEEKPELS
ITEVYRRFKIASEASGKGSQDIKVKNLQFLFTSSSPREAKYISRLALEELRIGVGEGVVR
DAIAKAFSVPAEIVEHSFMVTNDLGIVAAAAKKGGVEALERLGIEINRPIKMMLSQISPD
IDADIRAMKEVAIEWKFDGARVQIHKDGNSVTLFSRKLENVTSSLPDLVEIVRKHVKAES
AILDGEAVAVDENGVPRAFQEILKRFRRKYDVREKALGIPIQLNFFDIMYINGKTLIDLP
LLERRKALESCVESSVEDSKSISVAEQVITGDLELVEKIYREALKAGHEGVMVKNPNSVY
SPGKRGKNWLKKKPLMDTLDLVIVGAEWGFGRRANLIGSYTVACYDPDTTRFLQVGKVGT
GLTDDQLKELTEILSGLMEGGEAGGVFAIRPKVVLEIAFEEIQKSPNYDSGFALRFPRFI
RIRDDKDPEEADTIQRIGRVYSQQLKRL
NT seq 1707 nt NT seq  +upstreamnt  +downstreamnt
atgacaagtttcagggaatttgcagaaacgtgccaggcaattgaaaaaatatcaagcact
atagagaccacaaataaggttgccgaccttctcaaaaaggttgatgttgaagagcttcct
gttgccactcattttattatgagtgaggtttttcctgcctggagtggggaacagctcggg
attggcacaagcctgctttacgtttctctttccaaagcctcaggcatgtccatacacagt
atagaatctcttgtccggacgaccggagatataggggatacagcactccttatccttaaa
gaaaaaagaaaaaatcaggtgacattctcttctttctttgaggaaaagccagagctatca
ataacagaggtttacaggcgtttcaagatcgcatcagaagcttctggaaaaggttcacag
gatattaaggtcaaaaacctccagtttctgttcacttcatcaagtcctagggaagcaaaa
tacatctcaaggcttgcgcttgaagaactcaggataggcgtgggagaaggagttgtcagg
gacgctattgcaaaagctttttctgttcctgcagagattgtggaacattccttcatggtt
acaaatgacctcggaatagtggctgcagcggctaaaaaaggaggggttgaagctctcgag
agactcgggatagaaattaaccgccctatcaagatgatgctttctcagatcagccctgac
atagatgctgatataagagccatgaaggaggttgcaattgaatggaaatttgatggggcc
agggtccagatccacaaggacggaaattccgtaactcttttttcgcgtaaacttgaaaat
gttaccagttccctccctgacctcgttgaaatagtccgaaaacatgtaaaagctgagtca
gcgatccttgacggagaagccgtagctgtggacgaaaatggggttccaagggcttttcag
gaaattctcaagcgtttcaggcgaaagtacgatgtcagggaaaaggcactcggaattcct
atccagctcaacttttttgacattatgtacatcaacggcaaaactttgatagatctcccg
cttctcgagaggaggaaagctcttgagtcctgtgttgagagttctgtcgaggactcaaag
tccatttccgtggctgagcaggtcataaccggagaccttgagcttgtggagaagatctac
agggaagccttaaaagccgggcatgaaggagttatggttaaaaacccgaattccgtttat
tctcctggaaaacgcggaaaaaactggctcaagaaaaaacctctcatggacactcttgac
cttgtaattgtcggagctgaatggggtttcgggcgcagggcaaacctgatcggctcttat
accgttgcctgttacgaccccgatactactcgcttcctgcaggtaggcaaggtcggcacg
gggcttacggacgatcagctaaaagagcttacggaaatactctcagggctaatggaaggc
ggagaagccggaggagtatttgctatcaggccaaaggttgtccttgaaatcgcttttgag
gaaatccagaaaagccccaactacgactcgggttttgcacttcgttttccccgtttcatc
cgcatccgtgacgataaagacccggaagaagcggatactatccagcggatagggcgcgta
tacagtcagcagctgaaaagactgtaa

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