Methanosarcina mazei C16: MSMAC_1521
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Entry
MSMAC_1521 CDS
T04626
Name
(GenBank) Geranylfarnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac00900
Terpenoid backbone biosynthesis
mmac01100
Metabolic pathways
mmac01110
Biosynthesis of secondary metabolites
Module
mmac_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSMAC_1521
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mmac01006
]
MSMAC_1521
Enzymes [BR:
mmac01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSMAC_1521
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSMAC_1521
2.5.1.29 geranylgeranyl diphosphate synthase
MSMAC_1521
Prenyltransferases [BR:
mmac01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSMAC_1521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AKB71411
UniProt:
A0A0E3RVT6
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All DBs
Position
1861271..1862236
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AA seq
321 aa
AA seq
DB search
MTLVDEIKNRSSHVDAAIDELLPVTRPEELYKASRYLVDAGGKRLRPAVLILAAEAVGSN
LRSVLPAAVSVELVHNFTLIHDDIMDRDDIRRGMPAVHVKWGEAGAILAGDTLYSKAFEI
LSKVESEPVRVLKCMDVLSKTCTEICEGQWLDMDFETRKKVTESEYLEMVEKKTSVLYAA
AAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMTAPEEVLGKVRGSDLMEGKYT
LIVINAFEKGVKLDIFGKGEATLEETEAAVRTLTECGSLDYVKNLAISYIEEGKEKLDVL
RDCPEKTLLLQIADYMISREY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgttgatgaaattaaaaatagaagttcccatgttgatgctgcaatcgacgaa
ttgcttccggtaacccggcctgaagagctgtataaagcttcccgttacctcgtggacgcc
ggtgggaagcgccttcgtccggcagtcctcatcctggctgctgaagctgtcggttccaat
ctcaggtccgttttgcccgcagcagtctcagtggaacttgtgcacaatttcactctgatc
catgacgacattatggatagagatgacatccgcaggggaatgcctgcagttcacgtaaaa
tggggagaagccggagcaattcttgccggcgacaccctttattccaaagccttcgaaatc
ctctctaaagtcgaaagcgagcctgtgagggttttaaagtgcatggatgtcctttcaaag
acctgcaccgaaatctgcgaaggccagtggctcgatatggatttcgaaacccggaaaaag
gttactgaatccgagtaccttgagatggtggaaaagaagacctctgtcctctatgcagcc
gcagccaaaatcggcgcccttttaggaggggcttctgacgaagttgccgaggctttatcc
gagtacggacgcctcataggaataggcttccagatgtatgatgacgtccttgatatgacc
gcacctgaagaagttcttggaaaggtaaggggcagcgaccttatggaaggaaaatacacc
cttattgtcataaatgctttcgagaaaggcgtgaagctggatattttcggaaaaggtgaa
gcaactctcgaagagaccgaagcggcagtcaggactcttacagaatgcgggtctctcgat
tatgtgaaaaaccttgcaatttcatatatagaagaaggcaaagaaaaactggatgtcctc
agggactgtcctgaaaaaacccttctcctgcagattgctgactatatgatctcacgagaa
tactaa
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