Mycobacterium marinum E11: MMARE11_11570
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Entry
MMARE11_11570 CDS
T04774
Symbol
sigJ
Name
(GenBank) alternative RNA polymerase sigma factor SigJ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mmae
Mycobacterium marinum E11
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmae03021
]
MMARE11_11570 (sigJ)
Transcription machinery [BR:
mmae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MMARE11_11570 (sigJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
DUF4440
Motif
Other DBs
NCBI-ProteinID:
CDM75305
LinkDB
All DBs
Position
1395270..1396199
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AA seq
309 aa
AA seq
DB search
MAVLGAQAASTFESLRPHLMSVAYRLTGTVADAEDIVQEAWLRWDAAPGRDDVADLRAWL
TTVVSRLGLDKLRSAARRRETYTGHWLPEPVVTGLGDAGGADPLSAVVAAEDARFAVMVV
LERLSPDQRVAFVLHDGFAMPFAEVAGVIGASEAAARQLASRARKAVAAAPPPRPDPTHN
EVVGRLMAAMASGDLHSVVSLLHPDVTFTGDANGRAPTAARVICGADKVARFMLGLARRY
GPAFYTAYQLALVNGELGSYTLGTAGDGGHWAMLPRITAMTVRDGKVCALWDIANPDKFS
GSPLRDLVG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcttggggcgcaggcggcgtcgacattcgagtcgctgcgaccgcatctcatg
tcggtcgcctatcggctgactggaaccgtcgccgacgccgaggacatcgtgcaggaagcc
tggttgcgctgggacgcggcaccgggccgcgacgacgtggccgacctgcgtgcttggctg
accaccgtggtcagccggcttggcctggacaagttgcgttcggcggcccgccggcgcgag
acctacaccgggcattggctgcccgaaccggtggtcaccgggctcggggacgcggggggc
gctgatccgttgtcggcggtggtcgccgccgaggatgcccgctttgcggtcatggtggtg
ttggagcggctcagcccggatcagcgggtcgcgttcgtgttgcacgacgggttcgccatg
ccgttcgccgaggtggccggggtgatcggggccagtgaggctgccgcgcgccaactggca
tcgcgggcgcgcaaggccgtggcggcggcgcccccgcctcggcccgaccccacccacaac
gaggtggttggtcggctcatggcggccatggcttccggtgacctgcattcggtggtgtcg
ctgctgcatccggacgtgaccttcaccggtgacgcaaatggccgcgcccccaccgcggct
cgggtgatctgcggcgcggacaaggtggcccggttcatgctcggcctggctcggcgctac
ggcccagcgttctacacggcgtatcagttggccttggtcaacggcgaattgggctcctac
acactgggcacggccggcgacggcgggcattgggcgatgttgccgcgcatcaccgcgatg
acggtgcgcgacggaaaggtatgcgccctttgggatatcgccaacccggacaagttcagc
ggttcacccctgcgcgacctcgtcggctag
DBGET
integrated database retrieval system
