Mycobacterium marinum E11: MMARE11_23660
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Entry
MMARE11_23660 CDS
T04774
Symbol
uvrA
Name
(GenBank) excinuclease ABC (subunit A-DNA-binding ATPase) UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMARE11_23660 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_23660 (uvrA)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMARE11_23660 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMARE11_23660 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
SMC_N
AAA_16
AAA_21
RsgA_GTPase
AAA_25
AAA_33
nSTAND1
APS_kinase
ScfRs
DnaJ_CXXCXGXG
ExoX-like_C
NACHT
Viral_helicase1
DUF1421
cobW
Motif
Other DBs
NCBI-ProteinID:
CDM76513
LinkDB
All DBs
Position
2811689..2814604
Genome browser
AA seq
971 aa
AA seq
DB search
MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPTCGERIARQTPQQIVDQVLAMAEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV
DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKQRLTDSVETALNLADGIVVLEFPDD
HDEHDHPREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLV
VPDPDRTLAEGAVAPWSTGHTAEYFTRMLAGLGDALGFDVDTPWRKLPAKARKAILEGAD
EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCDGAR
LKPEILSVTLAAGEQDAKSIAEVCELSISDCADFLNALTLGAREQAIAGQVLKEIQSRLG
FLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLI
ETLTRLRDLGNTLIVVEHDEDTIEHADWVVDIGPGAGEHGGSIVHSGPYQELLRNQSSIT
GAFLSGREGIEIPTSRRSVDSRRQLTVVGAREHNLRGIDVAFPLGVLTSVTGVSGSGKST
LVNDILAAVLANRLNGARQVPGRHTRITGLDHLDKLVRVDQSPIGRTPRSNPATYTGVFD
KIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQGA
RYNRETLEVHYKGKTISEVLDMSIEEAAEFFEPISGIHRYLRTLVDVGLGYVRLGQPAPT
LSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFDDIRKLLNVISGLVDKGNTVVVIE
HNLDVIKTSDWIIDMGPEGGAGGGTVVAQGAPEDIAAVPESYTGKFLAEVLAARRPSTSG
RRPNRRRKVSA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccgcctgatcgtcaagggtgcgcgcgagcataacctccgcggtgtcgacctc
gacttgccccgtgatgcgctgatcgtgttcaccggtttatccggatcgggcaagtcctcg
ctggccttcgacacgatcttcgctgaaggccagcgccgctatgtggaatcactgtcggcc
tatgcccgccagttcctgggacagatggacaagccggacgtcgatttcatcgagggactt
tccccggcggtgtccattgaccaaaagtcgaccaaccgcaacccgcgttcgaccgttggc
accatcaccgaggtgtacgactacctgcgcctgttgtacgcacgggcgggcactccgcac
tgtccgacctgcggtgaacggatcgcgcgtcagaccccgcagcaaatcgtcgatcaggta
ctggccatggcggagggcacgcgattcctggtgctggccccggtggtccgcacccgcaag
ggtgagtttgcggacctgttcgacaagctcaacgcccagggctatagccgggtacgggtc
gacggggtggttcacccgttgacggatccgccgaagctgaagaagcaggaaaagcacgac
atcgaagtggtggtggaccggctcaccgtcaaagcggccgccaagcagcggctgaccgac
tcggtggagacggcgttgaatctggccgatggcattgtcgtgctggaattccccgacgat
cacgatgagcacgatcatcctcgcgaacagcgattctccgagaaactggcctgtcccaac
gggcatccgctggccgtcgacgacctggaaccacggtcgttttcgttcaactcgccttac
ggcgcctgccccgaatgcagcggtctggggattcgcaaggaggtcgatcccgacctggtg
gtgcccgacccggatcgcacactggccgagggcgcggtagcgccgtggtcgaccggccac
accgccgaatacttcacgcgcatgctcgccgggctgggggacgcactcggcttcgatgtc
gacaccccctggcgcaagctgcccgccaaggctcgcaaggcaattctggaaggtgccgac
gagcaggtacacgtgcgctatcgcaaccggtacggacgcacccggtcctactacgccgac
ttcgaaggcgttctggcatttctgcaacgcaagatggcgcagaccgagtccgagcagatg
aaggaacgctacgagggcttcatgcgcgacgtgccctgcccggtgtgtgacggggcccgg
ctcaagccggaaatcctgtcggtcacgttggccgcgggggagcaggatgcaaagtcgatc
gccgaggtctgtgagctgtccatctcagactgcgcagattttctgaacgcgctcaccctg
ggtgcgcgcgagcaggcgatcgccggtcaggtgctcaaggagatccagtcgcgactcggc
ttcctgctcgatgtcgggctggagtacctgtctttgtcgcgtgcggcggccacgctgtcc
ggaggcgaggcacagcgcatccggctggccacgcagatcgggtctggtctggtcggcgtc
ctgtatgtgcttgacgagccgtcgatcgggctacaccagcgcgacaaccgtcggctgatt
gaaactctcacccgcctgcgggatttgggcaatacgctgatcgtggtcgagcacgacgag
gacaccatcgagcatgccgactgggtcgtcgacatcgggccgggggccggcgagcacggc
ggcagcatcgtgcacagcgggccgtatcaggagttgctccgtaaccagagttccatcacc
ggtgccttcctgtccgggcgggaagggatagaaattccgaccagccgtcggtccgtcgac
tcccgccgacaactcaccgtggttggtgcccgcgagcacaacctgcgcggtatcgatgtg
gcgtttccgctcggggtgttgacctcggtgacgggagtttcgggttcgggaaagtcaaca
ctggtcaacgacatcctggccgcggtgttggcgaatcggctcaacggcgcccgccaggtc
ccgggccggcacacccgcatcaccgggcttgaccacctggacaagctggtgcgtgtggac
caatcgccgattggccgtacgccgcgatccaacccggccacctatacgggggtgttcgac
aagatccgcaccttgttcgcagccaccaccgaggccaaggtccgcggctatcagccggga
cgtttctccttcaacgtcaagggcggccggtgtgaggcctgcaccggcgacgggaccatc
aagatcgagatgaacttcctgcccgacgtgtacgtgccgtgcgaggtctgccagggcgcg
cgctacaaccgggaaaccctcgaagtgcactacaagggcaaaaccatctccgaggtgctg
gacatgtcgatcgaggaagccgcggagttcttcgagcccatctccggcattcaccgctat
ctgcgcaccctggtcgacgtcggcctgggctacgtgcggctcggccagcccgcgccgaca
ctgtccgggggtgaggcgcaacgggtcaagctggcatccgagctgcaaaagcgctcgacc
ggccgcacgatctacatcctcgacgagcccaccaccggtttgcatttcgatgacatccga
aagctgttgaacgtcatcagcggcctggtggacaagggcaacaccgtggtcgtgatcgaa
cacaacctcgacgtcatcaagacctcggattggattatcgatatgggaccggaggggggt
gccggcggcggcaccgtcgtcgctcagggcgcgccggaggatatcgccgcggtgccggaa
agctacaccgggaagtttctggccgaagtcttggccgcccggcgcccatcgactagtggg
cgccggccgaaccggcggcgaaaagtcagcgcctga
DBGET
integrated database retrieval system
