Mycobacterium mantenii: MMAN_08680
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Entry
MMAN_08680 CDS
T07431
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mman
Mycobacterium mantenii
Pathway
mman03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MMAN_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mman03400
]
MMAN_08680
Enzymes [BR:
mman01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MMAN_08680
DNA repair and recombination proteins [BR:
mman03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MMAN_08680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
BBY36734
LinkDB
All DBs
Position
complement(890258..891148)
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AA seq
296 aa
AA seq
DB search
MPSSGVEITHPDRVLFPADGTTKADLVAYYTEVADTMLPHLRGRPLNVQRFPRGIGETGF
LQQDYADALPEWMGRVQVTKEGGTVVHAVAERREALRWLASQNAITLHAWQSRREHLDKP
DRLVFDLDPSDSDFAVVRATARATAGVLHDLGLAHYLQTTGSRGLHVVVPLRADTDFDSA
RQFARGVAEVVVADDPGHRTVEARKDKRGGRVYLDIMRNAYAQTAVAPYSVRARAGAPVA
TPLEWEELDTRRLRADRFTIRDISKRLAGQPDPWANMSRHARSLTGPMKRLAASRA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagcggcgtcgagatcacccacccggaccgggtcctgtttccggccgatggg
accacaaaggccgatctggtcgcctactacaccgaagtggccgacaccatgctgccgcac
ctgcggggccgaccgctcaacgtgcagaggtttccccgcggcatcggtgaaaccgggttc
ctccagcaggattacgccgacgcgctgccggagtggatgggccgtgtccaggtcaccaaa
gagggcggaaccgtggtgcacgcggtggcagaacgccgggaggcgttgcggtggctggcc
agtcagaacgccatcacgctgcatgcgtggcagtcgcggcgagagcatctcgacaagccg
gaccggctggtcttcgacctcgacccgtccgacagcgacttcgcggtggtgcgggcgacg
gctcgcgccaccgccggggtgctgcacgacctcgggctggcacattaccttcagaccacc
ggatcgcgcgggctgcacgtcgtggtgccgctgcgggccgacaccgacttcgacagcgcg
cgccaattcgcccggggcgtagccgaagtggtggtcgccgacgaccccggacaccgcacc
gtagaggcgcgcaaggacaagcgcggcgggcgggtgtatctggacatcatgcgaaacgcg
tacgcgcagaccgcggtggcaccgtattcggtgcgggcccgcgcgggcgccccggtggcg
acgccgctggagtgggaggagctggacactcggcgactgcgcgccgaccggttcaccatc
cgcgatatttccaaacgacttgccggacaacccgatccgtgggcaaacatgtctcggcat
gcccgctcgctgacgggtccgatgaagcggctggcggcatcccgtgcctga
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