Modestobacter marinus: MODMU_4999
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Entry
MODMU_4999 CDS
T02167
Symbol
sigX
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mmar
Modestobacter marinus
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmar03021
]
MODMU_4999 (sigX)
Transcription machinery [BR:
mmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MODMU_4999 (sigX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_38
Motif
Other DBs
NCBI-ProteinID:
CCH90379
UniProt:
I4F416
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All DBs
Position
4995430..4996062
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AA seq
210 aa
AA seq
DB search
MRRRGTGMTRARPTPAPPPVAAPAPPPDDQRAVWELVRRAQDGDAEGFGELYDRYVDVVF
RYLFHKAGDRATAEDLTSETFVRALRRIDSLSYQGRDVGAWLVTIARNLLLDHVKSSRYR
LEVPTADMRDADRATAGPEEAVLQRLADAELMAAVARLSAEQRECLQLRFVQGLSVAETA
AAMGKREGAVKALQHRAVRRLASLVPEGLR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaggcgcgggaccggcatgacccgcgcccgtcccaccccggcccctccgccggtc
gccgcccctgcgccaccgccggacgaccagcgcgccgtctgggagctcgtccgccgggcc
caggacggcgacgccgagggcttcggggagctctacgaccgctacgtcgacgtcgtcttc
cgctacctgttccacaaggccggcgaccgggcgacggccgaggacctcaccagcgagacc
ttcgtccgcgcgctgcgccggatcgactcgctgagctaccagggccgggacgtcggcgcc
tggctggtcaccatcgcccgcaacctgctgctggaccacgtgaagagcagccggtaccgg
ctggaggtgccgaccgcggacatgcgcgacgccgaccgggccaccgcgggccccgaggag
gcggtgctgcagcggctggccgacgccgagctgatggccgcggtcgcgcggctgtccgcc
gagcagcgcgagtgtctgcagctgcgcttcgtgcaggggctgtcggtcgcggagacggcg
gccgcgatgggcaagcgggagggcgccgtgaaggcgctgcagcaccgggcggtgcgccgg
ctggccagcctggtaccggaggggctgcggtga
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