Marinomonas mediterranea: Marme_1463
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Entry
Marme_1463 CDS
T01449
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mme03032
]
Marme_1463
03400 DNA repair and recombination proteins [BR:
mme03400
]
Marme_1463
Enzymes [BR:
mme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Marme_1463
DNA replication proteins [BR:
mme03032
]
Prokaryotic type
DNA Topoisomerases
Marme_1463
DNA repair and recombination proteins [BR:
mme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Marme_1463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADZ90730
UniProt:
F2JXC4
LinkDB
All DBs
Position
1634206..1636851
Genome browser
AA seq
881 aa
AA seq
DB search
MGELAKEIIPVSIENELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELKNDWN
KPYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQPFSMRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMDKISHHLLMDLEKETVDFVPNYDESETMPEVLPARIPGLLVNGSAGIAVGMAT
NIPPHNLTEVINGCLALIDRPEIEIDELMEFIPGPDFPTGAFINGRAGIVEAYKTGRGRI
YMRARHHVEDMEKGNRQAIVFTEIPYQLNKAKVIEKIAELVKEKKLEGISELRDESDKDG
MRIVIELRRGENPDVVVNNIFTQTQLQSVFGINMVALVDGRPELLNLKQILECFVRHRRE
VVTRRTIFELRKARERGHILEGLAVALANIDRVIELIRTSPSSAEAREKLIAESWQPGDV
MAMLERAGADACRPDDLDPQFGFNNGAYRLSPDQAQAILDLRLHRLTGLEHEKLLSEYKD
LIAVIAELLEILGNPTRLMEVICEELEAVRDQFGDERLTEILTSRQDLTIADLIDEAPMV
VTISDTGYAKSQPLEEYKAQRRGGRGKSSATMKDEDHISHLLVTSSHDTVMLFSNFGKVY
WLRVFEIPVASRTAKGRPIVNLLPLAEGEHISALLPLNDEMEDSYIFMATANGTVKKTAV
EYFARPRSTGLIALSLDENDELVGVAQTSGENDIMLVSSSGKTIRFKESDVRAMGRTAAG
VRGIRLADEYKVVSLIVPQEGCSVLFACENGFGKRTLTEDFPVYGRGGQGVIGIQVSERN
GPVVGATQVEDTDEIMLISDQGTLVRTRASEVSCQGRNTQGVTLIRLMNDEHLVGVERVV
DEDDDAGEDAESEERGEEQATTPDAPEAEKTDEAPDSEGEE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaattagccaaagaaatcattcctgtcagtatagaaaacgaattaaaaggttcg
taccttgattacgcaatgagtgttatcgttgggcgagctctccccgacgtgcgtgatggt
ttgaaaccagtgcatcgccgtgttttgtatgcgatgaacgaattaaaaaatgattggaat
aaaccctacaaaaagtctgctcgtattgttggtgacgtaataggtaaatatcacccgcat
ggtgattccgcggtttacgagacaattgtccgtatggcccagcctttctcaatgcgttac
accttagtagatggtcagggtaacttcggttctgtcgatggtgatagcgctgcagcaatg
cgttataccgaaataagaatggacaaaatctctcatcacttattgatggatttagagaaa
gagaccgttgactttgttcctaactatgatgaatcggaaaccatgccggaggtgcttcct
gcacgaatccctggcttattggtaaacggttctgctggtatcgctgtgggtatggcgacc
aatatccctcctcataaccttactgaagttattaatggttgtttggctttgatcgatcgt
cctgagattgagatcgatgagctgatggagtttattcctggtcctgatttccctacaggt
gcgttcattaatggtcgcgcaggtattgttgaagcttataaaacagggcgtggtcgcatc
tatatgcgtgctcgtcatcatgttgaagatatggaaaaaggcaaccgacaggcgattgtc
tttactgagattccatatcagctgaacaaagcaaaagttattgaaaaaatcgctgagctt
gtaaaagagaaaaagcttgaaggcatcagtgaactgcgtgacgagtctgacaaagacggt
atgcgtattgtgatcgagcttcgtcgcggtgaaaaccctgatgtcgttgtgaacaatatc
tttacccaaactcagttgcagtctgtgtttggtattaacatggttgccttggttgatggg
cgtcctgagttgcttaatcttaagcaaatccttgagtgctttgtacgccaccgtcgcgaa
gtagtaactcgacgtactatctttgagcttcgtaaagcgcgtgagcgtggtcatatactc
gaaggtttagccgttgcgcttgctaatattgatcgcgtaattgagctgattcgtacttca
ccgtcttctgcagaggcgcgtgagaagttgatcgctgaatcgtggcagccaggtgacgtg
atggctatgttggaaagggctggcgcagatgcttgtcgccctgatgacttagatcctcag
tttggctttaataatggcgcgtatcgcctatctcctgatcaggcgcaagctatactggac
ctacgtttacaccgtctaactggattggagcatgagaagttactttctgagtacaaagat
ctcattgctgttatcgctgagttattggaaatattaggtaatccaacgcgcttgatggaa
gttatttgtgaggagttggaggctgttcgagaccagtttggtgacgagcgcttgactgaa
attctcacttctcgtcaagacctaaccattgcagatcttattgatgaagcgccaatggtt
gtgactatttcggatacaggttatgcgaagtctcagccacttgaagagtacaaggctcag
cgtcgcggcggacgaggaaagtcctctgcaaccatgaaagacgaagatcatattagtcac
cttttggtcactagtagccatgatacggttatgttgttcagtaactttggtaaagtctat
tggctgcgcgtgtttgagattcctgtagcgagccgtactgctaaaggtcgtccgattgta
aacttgttgccattagcagaaggggagcatatctctgctttgcttccgcttaacgatgaa
atggaagattcgtatattttcatggcgacagcgaatggtactgtgaagaagactgctgtt
gagtactttgctcgcccacgttcaacaggcttgatcgctttaagtctcgatgagaatgat
gagcttgtgggtgtggcgcaaacgtcaggcgaaaatgacattatgcttgtgtccagttcc
ggcaaaacgatccgatttaaggagagtgatgttagggcaatgggtcgtactgcggccggt
gttcgtggtatccgtttagcggatgagtataaggtggtttcacttatcgttccgcaagaa
ggttgttctgttctattcgcttgtgagaatgggtttggtaagcgtacattgaccgaagac
tttccagtgtatggtcgaggtggacaaggtgtcattggtattcaggtttccgagcgtaat
ggtccagttgttggggcgacgcaggtcgaggatacagatgaaatcatgctgatttctgat
caggggactcttgttcgtacgagagcgtctgaggtttcttgccaaggtcgaaatactcag
ggtgtgactttgattcgattgatgaatgatgagcatcttgttggtgttgagcgtgttgtc
gatgaagatgacgatgctggcgaagatgctgagtctgaagagcggggtgaggaacaggct
acaacgcctgatgcaccagaggctgaaaaaacggacgaagcgcccgacagtgaaggcgaa
gagtaa
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