Malurus melanocephalus (red-backed fairy wren): 130588989
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Entry
130588989 CDS
T09178
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04510
Focal adhesion
mmea04512
ECM-receptor interaction
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130588989 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130588989 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130588989 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmea04147
]
130588989 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130588989 (COL4A2)
Exosome [BR:
mmea04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
130588989 (COL4A2)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130588989 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
130588989
NCBI-ProteinID:
XP_057246045
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MDISQLPSARIFLCQDTGLLLILIQVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGAQGFSGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTEGDPGDFGIPGRSGFPGSIGVQGPKGQKGEPYILAPEI
IHRYRGDPGDSGLIGFPGPPGTLGIQGPVGPRGQQGRPGPPGPPGPPGPQGSRGLGYYGE
KGEQGPPGPPGPPGLPTGELXGVPTDKHKGERGDPGPRGETGIPGVLLFPLEKGEEGVMG
YPGQRGLPGITGFPGLSGERGFQGLDGPPGGYGPRGGKGEPGEMGPPGPDSYFPSRIPRK
GARGDPGFPGASGLPGDRGEEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAF
YAGPPGFPGKDGPPGLQGPPGPAGAPGALFGFKGREGTQGRYGLQGFPGPRGQKGPKGEE
GDCSTCLLREELRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGLPGFPGAKGFSGPAG
FPGRKGEKGDSLHITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDAIRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFRGPPGDQGQAGTPGSPGLPGLPGEPGQL
DCGQVTEDFPRGDATEPIWSGAGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPVGYPG
LNGTRGDPGREGXPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGLKGLPGDVF
GAAAGSRGDAGLPGFPGLKGAPGDQGVPGARGADGSPGLPGSKGEPGPQGLPGLMGLPGT
PGTHGFPGPPGSRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLAGDKGDMGHTGL
PGIRGVIGPPGISGMDGFPGDKGTKGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGTRGD
KGSQGARGFKGDRGDQGPPGDPPKLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGL
PGRTGTPGSPGHPSYVAGVKGDVGAKGLTGLKGYPGPAGSPGIRGFPGTTGVRGEKGIPG
TSGHFGTPGTHGEIGDRGDTINLPGMPGLKGEIGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQKGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAGQPGLRGIN
GLHGLPGTKGLPGSPGPDGYGSAGFPGVGGDKGEAGEPSRVXGSRGPPGQKGDRGVPGVP
GPFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGIPAPPGSKGESGQA
GRTGEIGPKGSRGDPGSAGSPGLPGFPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGSPGLPPLPPRLVAEPGSPGPRGNIGPRGSPGDTGLPGPPGDPGFRGSPGE
PGLQGRGGIPAPPGARGEQGGMGFQGPVGSEGQPGRPGSPGPPGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPRCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFESKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcctagtgcacgtattttcctttgtcaggatacggggcttttg
ctgatcctgatacaagttgtgctgtcagccgtcaaagtggacgctggtggaaaaaaatac
acaggaccctgtggaggcagagactgcagtggaggatgccagtgtttccctgaaaaagga
agccgtggccagccaggactccttggagcacaggggttcagtggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattcccyggggcagatggc
attcctggtcatccagggcagccaggaccaagggggaaaccaggtcatgatggctgtaat
gggacagaaggtgaccctggtgactttggaattcctggacgctctggttttcctggttcc
attggagtccaggggcccaagggccagaagggggagccgtacatattagcaccggagatc
atccaccgatacaggggagatcctggggattcagggctcattggttttccaggacctcca
ggtacrctgggtattcaaggacctgttggtccaagaggacagcaaggaagaccaggacca
ccaggacccccaggccccccaggaccacaaggcagcaggggccttggctactatggcgaa
aaaggtgaacagggccccccaggtcctccgggtccacctgggcttcctacaggagaactg
atkggtgtccccactgacaaacacaagggtgaaagaggagaccctggaccaagaggggaa
actggaattccaggtgtacttctctttcctcttgaaaaaggtgaagaaggggtgatgggc
tacccaggacaaaggggactgcctggcatcactggctttccaggactcagtggagaaaga
ggttttcaaggattggatggtccacctggtggctatggccctagaggaggcaagggggag
cctggtgagatgggtcctccagggccagattcctatttcccttcccgcatcccaaggaaa
ggtgcaagaggtgatccaggcttcccaggtgcttctggactaccaggagaccggggagag
gagggagatcgtgggctgcctggtcttcctggattttctgatgcggatggggataagcca
ggcttacctggagaaatggggccaaaaggtgaaaagggtgaaataggatctcctgctttt
tatgcgggtccacctgggtttccgggtaaggacggcccgccaggacttcaaggcccacct
ggtcctgctggagcccctggtgctctctttggattcaaaggacgggagggaacacaaggt
agatatggtctacagggtttccctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcagtacatgccttttgcgtgaggagcttcgaaggggctccactggcccccct
ggccctcctggctttccaggaacccctggccagcctggcaggaagggagaacctggtgat
caaggaccacatggtcttcctggcttccccggagcaaaaggattttcgggtccagctgga
tttcctggacggaaaggagaaaagggagattctttacacataactacgaaaggcaccaaa
ggaatccgaggagatccggggctgcctggtatcagaggtgaagatggattccctggcaga
gatggattagatggtttaccaggacagcctggcctcccgggtgatgccatcagaggtttc
ccaggtgatccwggttatccaggggaattaggcccaaagggctttccaggagaagcaggt
ctgccaggtgaaggatttcctggtccaaaggggttccggggtcctccaggtgaccaagga
caagctggaactccaggatctccaggtctgcctggtctgccaggagarcctggccagctg
gactgtgggcaggtcactgaagattttcctagaggggatgcaactgagccaatatggtca
ggtgcaggctgtgtgaggccaccaaagggatcccaaggcaagccaggactgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtgggctacccagga
ctaaatggtacacgaggtgatccaggtcgggaaggaytcccaggtcctccaggttttact
ggacccaggggagacagaggcccgaatggtctgcccggactgcagggacacccaggcctt
acaggaaaatccggagctccaggagcaccaggactgaagggccttcctggygatgttttt
ggagcagcagcaggttcccggggggatgctggcctccccggcttcccagggttgaaaggt
gcaccaggagatcaaggagtgccaggagcgagaggagcggatggcagcccaggtttgccg
ggatccaaaggagaaccagggccacaaggtctccctggtttgatggggttaccaggaaca
ccmggaacgcatggattcccagggccaccaggaagccgtgggccagatggagggcctggc
tctcaaggacctctgggaccacctggagcgaggggagaagatggtgagcaaggctttcct
ggccccgtgggcctgaagggtctggctggtgacaaaggtgacatgggtcacacgggatta
ccgggcatacgtggcgtaattggtccccctggcataagtggaatggatggctttccagga
gacaaaggcacgaaaggttcacctggcattgatggtttcaaaggcatgacaggactaaaa
ggaagaccaggaatcaagggaatcaaaggagagtttggcccactcgggactcgrggcgat
aaaggctcacagggtgcacgtggcttcaaaggtgaccgtggggatcaaggcccyccagga
gaccccccaaagctcatgcccagcatgatgatggaagttaaaggcgaaaaaggagatgtt
ggagaaaggggcacaaagggattctttggcttgaaaggtagcaagggaatgccaggcctt
cctggaaggacaggaaccccagggtcccctgggcatcccagctacgtggcaggtgtgaaa
ggagacgtcggtgccaaagggctgacgggtctcaaagggtatcctggtcctgctggctct
cctggcatcagaggcttccctggcacaacaggagtcagaggagaaaagggtattccaggc
acttcaggccattttggtactcctggcacacatggagaaataggtgatcggggagatact
ataaacttaccaggaatgccaggccttaaaggggaaattggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggcattgaa
ggtctcaagggcacgcagggtgtccctggctctgtgggacagaaaggtctgccaggactg
gttggccccccagggcagcaaggaagccccgggacacctggatttcaaggtgaaaaggga
actcccggctggcctggcttaccaggacaagcaggccagccaggcttaagaggaatcaat
ggactgcatggtttaccaggcactaagggcttgccaggatccccaggtccagatgggtay
ggctctgcaggtttcccaggtgtagggggtgacaaaggagaagcaggagagccaagcaga
gtagmaggcagccgaggacctccagggcagaagggagacagaggtgttccaggagtacca
ggaccctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcccggtgataaaggctccccaggtctagatggagtgccaggctatccagga
ccacaggggcagcctggaatacctgctccaccaggaagcaaaggagaaagtggacaggca
ggyaggactggagaaattggcccaaaaggaagtagaggtgatcctggatcagcaggaagt
cctggccttcccggattccctggaccaaaaggtcgtaaaggtgaacaaggtgtcatyggc
tttatgggcacwgtaggatttccaggtgatttgggacctatcggacccaagggagataga
ggagtractggcttccagggacctccaggctctcctgggctgccccctcttcctccaagg
ctggttgctgagccaggttcaccaggtccccgtggaaatataggacctcggggaagccca
ggagatacaggacttccaggcccmccaggagatccaggtttcagaggatcacccggagag
ccaggactccarggcaggggtggcattccagctcctcctggcgccagaggggaacaagga
ggaatgggatttcagggcccagtgggatctgaaggtcagccaggccgccccggtagccct
gggccaccaggcatgccaggtcgcagtgtcagcatgggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtattttgaagggcaagagaaagcacacaaccaggatctagggctggctggctca
tgtttgtctcgttttagcaccatgccattcctctactgtaaccctggggatatttgttat
tatgcaagtcgaaatgataaatcctactggctctccacgacagcacctcttcccatgatg
cccgtggcagaagaggacattaagccatacatcagccgctgctcagtttgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattcctcgctgccctgaaggctgg
cgcagtttgtggatcggatattccttccttatgcacactgctgctggtgatgaaggcggg
ggacagtcgctggtttctcctggsagctgcctggaagacttcagggccactcctttcatc
gaatgcaacggcgcmcgcggaacctgtcactactttgccaacaaatacagcttctggctc
accaccatcgaccaacccttcgaaagcaaaccctcgggagacacgctcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaacttatag
DBGET
integrated database retrieval system
