Mercenaria mercenaria (northern quahog): 123541741
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Entry
123541741 CDS
T07835
Name
(RefSeq) SKI8 subunit of superkiller complex protein-like isoform X1
KO
K12602
WD repeat-containing protein 61
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123541741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123541741
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
123541741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Nup160
Cytochrom_D1
WDR54
WD40_3
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
123541741
NCBI-ProteinID:
XP_045183248
EnsemblRapid:
LOC123541741
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All DBs
Position
19:40889125..40926045
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AA seq
315 aa
AA seq
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MAGSALSVSSRDKLYSIINKQENAHEDSIWSCAWGRSNKDNTENIITGSIDDKVRIWKWI
DEKLELRHLLEGHQLGVVSVDINAEGTLAASSSLDSHVRVWDIETGKCAKSIDAGPVDAW
TVAFSPDSRFLASGSHHGKINLFGVDTGRKESSLDTRGKLTLSIAYSPDGKFIACGAIDG
IVNMFDIATGKLIHTLEGHAKPIRSLCFSPDSQLLVTGSDDNQIKIYDVLHANLAGTLSG
HASWVLSVAFSPDNTHFVSSSSDKTVKIWDAGSRQCVHTFYDHTDQVWAAKYNQAGTRIV
SVSDDKAMHIYDIPQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtagtgctctgagtgtatcttcaagagataaactgtattcaatcattaacaag
caagaaaatgcacatgaagacagtatatggagttgtgcatggggacgaagtaacaaagac
aacacagaaaacatcatcacaggcagcatagatgataaagttagaatctggaaatggata
gatgagaaactagaactgcgacatctgttggaaggacatcaacttggagttgtttctgta
gacataaatgcagagggaactttggcggcatccagtagtttagacagtcatgtgagagtg
tgggatatcgagacaggaaaatgtgctaaaagtattgatgctggtccagtggatgcatgg
actgtagcattttcaccagattcccggttcctggcctctgggagccatcatggtaaaatc
aatctatttggtgtggacaccgggaggaaggaatcttcattagataccagaggaaaatta
acacttagtatagcatatagcccagatggaaaatttatagcatgcggggccattgacgga
attgtaaatatgtttgatattgctactggaaaactcatacacacactggaaggtcatgca
aagcctatcagatctctctgcttttcaccagattctcagctgttagtgacaggttcagac
gataaccagataaagatatatgacgtgttacatgctaatttagcaggaacattgtctgga
catgcctcctgggtacttagtgtagcattttcaccagataatacacattttgtttcaagt
tcctcagataaaacagtcaagatttgggatgcaggatccagacagtgtgtgcatacattc
tatgatcatacagatcaggtttgggcggcaaagtacaatcaagctggtaccagaatagtg
tctgtatctgacgacaaagcaatgcatatttatgatattccacagtga
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