Mercenaria mercenaria (northern quahog): 123549123
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Entry
123549123 CDS
T07835
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmer01002
]
123549123
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123549123
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123549123
Peptidases and inhibitors [BR:
mmer01002
]
Cysteine peptidases
Family C67
123549123
Ubiquitin system [BR:
mmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123549123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Top1B_N_bact
Motif
Other DBs
NCBI-GeneID:
123549123
NCBI-ProteinID:
XP_045192895
EnsemblRapid:
LOC123549123
LinkDB
All DBs
Position
6:complement(40455995..40614050)
Genome browser
AA seq
936 aa
AA seq
DB search
MSSERFCILLTKCLGKKKEKKFMKSSTSKVEILPGTLLLLLDVIKNSAPPNQLQFVLETL
DQEDVEVTCSRDDFNDISRDEYELLINVPTCADRYQIFMNKEWMQEGQKMKVGDYVEVYD
KASAKDLIGILRFRGHVHGLNGIHFGVELVYNKGQGHSDGMFRNQRYFQCAPESALFVGL
HRIRQHKGPPPQRQSDIAGASAANVYSQYGKENAYGLKMGDRIVWISDEGPEAGVVKWIG
LLPDCRADDDITVGVEFDHPVGSGTGKYRDQRLFTAKQNHASLVPILGLMKEEEYRNESR
PVDSENALAAFTEAGCIGKTQEEVIEEQRRIMEEARLQKFSPRLPADGTQQPDIKHEKKN
SFEVVEHAMVHAAPSSNVQTPPAACKGFPDTKGINPLYEYSRSKHDYLTEGLGEVLIPHG
SQGVNSRHKPLPEPDPELGIGSLVEVMSTKPLYGLIKWIGNLPDQKEPKKLIAGLEMEEE
TTAGTDGTFGSHRLFNCPARKGLFVPLYKCRKDKRFIDDRQLRIQTSDRSINFGSTETPD
LPGTVSPPTSLENISLICGKGRGIQGHHNSCYMDATLLAMFYFTTVFDSILHRPKILSDI
QEYQEVQQVLKEGIVNPLRRHHYVRADKMMKLRKLLDKVGKIPGMMSEEKDPEEFLNLLL
NEITKADPFLKICAEDNQETQHTYFYQLIMEKDERLVLPTTQQLFELSFLQIGIKLKEVP
SCLIIQMPRFGKDYKMYKRILPSLELDITDVLENAPRECIICGDLAAFECKECYQVHGAG
LNTIAFCDGCKKTSHQHKQRVNHRCRKISVPPAYRDLYLSRKVSEGRPIPIPREKMELFA
VICIQTSHYVSFVKTGKGRDAKWIFFDSMADRMGEQSGYNIPEVCECSEIPRWLSDECYN
DIMKYPEDKTLPEHMRRLICDAYICMYQSPQVMMFK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgaaagattctgtatactgttaacaaaatgcctgggtaagaagaaagagaag
aagttcatgaaatcatccacttcaaaagtagaaatactaccaggaacattgttactactt
ttggatgttatcaaaaactctgctccaccaaatcaattacagtttgttttagaaactctt
gaccaggaagatgtggaggtgacgtgttcccgtgatgatttcaatgatattagcagagat
gaatatgaacttttaataaatgtgccaacttgtgcagacaggtatcaaatatttatgaat
aaagaatggatgcaggaaggtcagaaaatgaaagttggagattatgttgaagtttatgat
aaagcctccgcaaaagatttgataggaatactgcgattcagaggtcatgtgcatggtctt
aatggaatccacttcggtgttgagcttgtgtacaacaaaggtcaaggtcacagtgacgga
atgttcaggaatcagcgttactttcaatgtgctccagagtcagcattatttgtgggtctt
cacagaattcggcaacataaagggccacctccacagcgtcagtcagacatagccggagcc
agcgctgcaaatgtgtacagtcagtacgggaaagaaaatgcttatggattaaagatgggt
gatagaattgtgtggataagtgatgaaggaccagaagcaggagttgtcaagtggattggg
ctacttccagattgcagagcagatgacgacatcactgttggagttgaatttgatcatccg
gtgggttcaggtacaggaaaataccgagatcagcgactgttcacagccaaacagaaccat
gcttctcttgtacctatactaggacttatgaaagaagaagagtatcgaaatgaatctagg
ccagttgacagtgagaatgcattggctgctttcactgaagcgggttgtattgggaaaacc
caagaggaggttattgaggaacagagacgcatcatggaggaagctcgcttacagaagttc
tctccaaggctaccagcagacggaacacaacaaccagacatcaaacatgagaagaaaaac
agttttgaagttgtagagcatgccatggttcatgctgctccatcctcaaatgtacaaact
ccaccagctgcttgcaaaggcttccctgacactaaaggcataaatcctttatatgaatat
tcaaggtcgaaacatgattatttgacagagggacttggtgaagttttgattccccatgga
tctcaaggtgttaattcacgtcataaacctttacctgaaccagatccagaacttggaata
ggttctctggttgaagtcatgtcaaccaagcctctgtatggtctcatcaaatggattggg
aacctccctgaccagaaagagccaaaaaagttgattgcaggacttgaaatggaggaagag
acaacagcaggcacagatggaacttttggaagtcatcgattatttaactgtccagctcgt
aaaggactctttgtaccattatataaatgtcgcaaggacaaacgtttcatcgacgaccgt
caactgcgtattcagacatcagacaggagcataaacttcggcagtacggaaacaccagat
ctacctggaactgtttcaccacctacttctcttgaaaatattagtcttatttgtggaaaa
ggtcgtggaattcaaggccatcataattcttgttacatggatgctacactattagctatg
ttttattttacaactgtgtttgattcaatattacaccgtccaaaaattctgtcagatata
caagaataccaggaagttcaacaagttttaaaggaagggattgtaaatccattaagaagg
catcactatgtgagagctgataaaatgatgaaattgagaaagttgttagacaaagttggc
aaaataccaggcatgatgagtgaagaaaaggatcctgaagaattcttgaatttgcttcta
aatgaaataactaaagcagaccctttcctcaaaatttgtgctgaagacaatcaggaaaca
caacatacatatttctaccagttaataatggagaaagatgaaagactagttctaccaaca
acacaacaattatttgaactatcatttctacagattggtatcaagcttaaagaggtgcca
tcttgtttgatcattcagatgccaagatttggaaaagattataagatgtacaaacgcata
ctgcctagtctagagcttgatattacagacgttttagaaaatgcaccccgagaatgtatt
atatgtggagatctggcagcatttgaatgtaaagagtgctaccaggtacatggggcaggt
ctaaacactattgctttttgtgatggatgtaaaaaaacaagtcatcagcataaacaacgt
gtgaatcacagatgtagaaaaataagtgtaccaccagcttaccgggacttgtacttgagt
cgtaaagttagtgagggaaggcctattcccatacctcgagaaaagatggaactgtttgct
gtcatctgtatacagacaagccattatgtatcatttgtgaaaactggcaagggtagagat
gctaagtggatcttctttgattcaatggcagacagaatgggtgaacaaagtggatacaat
attcctgaggtatgtgaatgcagtgaaatcccacgttggttgtcagatgaatgttacaat
gacattatgaagtatccagaagataaaactcttccagaacatatgagacgtcttatttgt
gatgcctatatttgcatgtaccaaagtcctcaagttatgatgtttaaataa
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