Mercenaria mercenaria (northern quahog): 123553947
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Entry
123553947 CDS
T07835
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04136
Autophagy - other
mmer04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123553947
04136 Autophagy - other
123553947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123553947
03029 Mitochondrial biogenesis [BR:
mmer03029
]
123553947
Membrane trafficking [BR:
mmer04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123553947
Others
Rab GTPases of specific organelles
Auto phagosome
123553947
Mitochondrial biogenesis [BR:
mmer03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123553947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
eIF2A
Nup160
DUF4472
TSC22
ChaB
KASH_CCD
QueG_DUF1730
Syntaxin_2
bZIP_2
bZIP_1
Hira
DUF5053
DUF4047
Motif
Other DBs
NCBI-GeneID:
123553947
NCBI-ProteinID:
XP_053404621
EnsemblRapid:
LOC123553947
LinkDB
All DBs
Position
7:complement(71435423..71476782)
Genome browser
AA seq
437 aa
AA seq
DB search
MKEKEKELQLKDSKLMDALALENSLKAEIKHLEHTVFELEATNQTLKDEHQALQMAFTAL
EEKYHKVQEENSELMARWLSQKMKEADVMNQENDRFFRHKQERLQKDLEDAASEPVQIQA
EAITGVYMRGVTPICLSASLPTKAQCILDAHEGEVNAVLWSPTGSLFATGGSDRKIKLWD
YNGGQCTCKGTLLGSNAGITALEFDFDEAFVLGASNDYASRLWSLSDQRLRHTLTGHSGK
VLTAKFLGDSTKVVTGSHDRTLKIWDLHTRACSKTIFAGSSCNDLVTLHASSIISGHFDK
RVRFWDPRSDQTINEISLQGRITSLALSPDRATLLACTREDTLKVIDLRMNQVVYTLSAD
NFKVAFDYSRAVFSPDGSYAMAGSSDGTLYIWNIKKEKVERTLKEHTHAIMACSWHPSGS
VILSSEKQKKVVLWSDI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaggagaaagaacttcagctcaaagattcaaagctgatggatgcactggct
ctagagaacagtttaaaagctgaaataaagcatttagaacatactgtgtttgaactggag
gctacaaaccagacattgaaagatgagcaccaagcattacagatggcatttacggcactg
gaggagaagtatcataaagttcaggaagaaaatagtgagctgatggcccgctggctcagt
cagaagatgaaggaggcggatgttatgaatcaagaaaatgacaggtttttcagacacaaa
caagaacgtctacagaaagatttggaagatgctgctagtgaaccagttcagatccaggct
gaagcgataactggtgtgtatatgagaggtgtaactccaatttgcctaagtgcatcacta
ccaacaaaagctcaatgtatattggatgcccatgaaggggaggtaaatgctgtattatgg
agccccacaggaagtttgtttgcaactgggggatcagacagaaaaatcaaactctgggat
tataatggaggtcagtgtacatgtaaagggacattactgggcagtaatgctggtattact
gcccttgagtttgactttgatgaagcatttgtacttggagcatcaaatgattatgccagt
agactgtggtctttgtctgatcagagattaaggcacacgttgacaggtcacagtgggaaa
gtgttaactgccaaatttcttggtgattctactaaggtagtaacaggaagccatgacaga
acattaaaaatctgggatcttcatactagagcgtgttcaaaaacaatatttgctggatca
agttgtaatgatttagttacgttacatgctagcagcataataagtggacatttcgataaa
cgtgtaagattttgggatccacgttcagatcagacaatcaacgagatttcattgcaagga
cgaatcacatcattagctttatcaccagaccgagcaacactgctggcatgtacacgagag
gacacattgaaagtgatagatctacgcatgaaccaagttgtctacacattaagtgctgac
aacttcaaagtagcatttgactattctagagcagtttttagtcctgatggtagttatgca
atggcaggatcctctgatggaacgttgtatatctggaatataaagaaagaaaaagtcgag
agaacgctgaaggaacatacgcatgctataatggcctgttcctggcatccatcgggctct
gtcatactcagctcagaaaaacagaagaaagtagttctctggtcggacatttaa
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