Mercenaria mercenaria (northern quahog): 123560974
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Entry
123560974 CDS
T07835
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123560974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123560974
03036 Chromosome and associated proteins [BR:
mmer03036
]
123560974
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123560974
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123560974
PBAF complex
123560974
GBAF(ncBAF) complex
123560974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM-assoc_3
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
123560974
NCBI-ProteinID:
XP_053408150
EnsemblRapid:
LOC123560974
LinkDB
All DBs
Position
10:complement(4374786..4403925)
Genome browser
AA seq
1049 aa
AA seq
DB search
MAVQRKKDGVPNAKFFESVETIAQFDSVRTWLHKNCKKYTQADPPTNKSLSSLVLQLLQF
QEDAFGKSVNNSPLTKLPMKCFLDFKPGGALCHILSAVFKFKTDQGWRRFDFASPSRMDR
NVEMFMQIMKSLVANKCHIQPCVYIKPTLDKPLISRLKDIVKKHQGSISDSEEDATHVIH
GMPASSGQEDEWCRPVMKRDKHALVHWWYTPDSYDNWIPDLGCDQEPEPSWSPPGPWEVT
ARWLLDLEEYNEWMNEEDYLVEEEVSVPVERSRVRYEGKKVKKKLPTKYSPEELVGDEKK
DKKKGKRKRSPSPPPEKKKRKSGRTAVTGSAVKKNRRDEEEEDLTQDLEDPTPESNIQEV
QLSKTASRSNRDSELQPIKGGTVVDMDDEQSQQMGEEKMEDGEEQTEMKKEKEETEDSVT
EQTHHIIIPSYASWFDYNGINAIERRALPEFFNGKNRSKTPEVYMAYRNFMLDTYRLNPM
EYLTSTACRRNLAGDVCAIIRVHAFLEQWGLVNYQVDAESRPTAMGPPPTSHFHILADTP
SGLQAANPPRLNQPSAAKQIVSFEEPKDGEDKKELTNFGLRTDIYGKKSQKDKGAATRTR
DWTDQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILQFLRLPIEDPYLDEDYGHLGPL
AYQPLPFSQAGNPVMSTVAFLASTVDPRVASAAAKAALEEFSKMKDEVPPALIDAHVKMV
EKAATEGKEVDQEFGLDQSGIAGTVPEKEEEEKKEEGKEKKEGEGENKDEKAESDIKKEA
METDQAEKKTEEQTQEAKDGEKIEEKKEQDEATKEGEKSAEDEEKKEETSKGKEIVKRMD
DKEKGNVATAAAAALSAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFDELEA
IMDREREALEYQRQQLLQERQQFHMEQVRAAEYRARQIAMQQMAQEQKQTPQGAADGSIS
GQAPASTQPSAVGHTYPTSSSPMTPMGPTAQQGSPAPPPATQPLPPSNQAQTGPPKPATP
VPGGEGGDSNASSEPMDTQPPPSSAVSAT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcaaagaaagaaagacggagtccccaatgcaaaattctttgaatcagttgaa
actatagctcagttcgattcagtcaggacttggctgcataaaaattgcaaaaagtacaca
caagcagatccacctaccaacaagagtttgtcaagtctagttctgcagttacttcagttt
caagaggatgcatttggcaagtcagtcaacaactcaccacttacaaaactgcctatgaaa
tgttttctggacttcaagccaggtggagctctttgtcatatcttgtctgctgtcttcaag
tttaaaactgaccagggatggagaaggttcgattttgcatcgccctcgaggatggacaga
aatgtagagatgttcatgcagatcatgaagtctctggtggcaaacaaatgtcacatacag
ccatgtgtttatattaaaccaactctggacaaaccactgatctcgagactgaaggatatt
gtgaaaaaacatcagggttctatatctgacagtgaggaggatgcaacacatgttatacat
ggcatgccagcaagctcaggacaggaagatgaatggtgtaggcctgtgatgaagagagat
aaacatgcgctggtccactggtggtatacacctgacagttatgacaactggataccagat
cttggctgtgaccaggaaccagaaccatcatggtcaccacctggaccttgggaggtcaca
gcacgttggttactggacctagaagagtacaatgaatggatgaacgaggaagattacctg
gtggaggaggaggtcagtgtccctgtagagagaagtcgtgtgcgctatgaaggtaaaaag
gtgaagaagaagttaccaaccaaatattctccggaagagcttgtgggtgatgagaaaaag
gataagaaaaaaggtaaaagaaagagatcaccctcaccaccaccagagaaaaagaagaga
aaaagtggtcgtacagcagtgaccggctcagcggtgaagaaaaaccgacgtgatgaggaa
gaggaggatttaacccaggacctggaagatcccacaccagaatcaaatatacaggaggtc
cagctctctaaaacagcatctcggagtaacagagacagtgagttacagccaattaaagga
ggtacagtggttgatatggatgatgagcagtcacaacagatgggagaggaaaagatggaa
gatggagaagaacaaacagaaatgaagaaggagaaggaagagactgaggacagtgtaaca
gaacagacacatcatattatcatacctagctatgcttcctggttcgattataacggaatc
aatgccatagagagacgagctctacccgagttcttcaacggcaaaaataggtccaaaact
cctgaagtatacatggcgtacagaaacttcatgttggacacatacagattaaacccgatg
gagtatttgacaagtacagcttgtagacgcaatcttgctggtgatgtttgtgcaataatt
agagtacatgcatttttggagcaatggggtttggtcaactatcaggtagatgcagaaagt
cgaccaacggccatgggacctcctccaacatcacatttccatatcctagcagacactcca
tcaggtcttcaggctgctaacccacctaggttaaatcagccatcagctgcaaagcagatc
gtgagttttgaggaaccaaaagatggcgaagacaaaaaagaactaacaaactttggtctg
agaacagacatctacggcaagaaatcacaaaaggataaaggtgctgccacaaggacacgc
gactggacagaccaggagacgctgttgttgctcgaagcactggagatgtacaaggatgac
tggaacaaagtgagtgaacatgtcgggagtcgtacccaggacgagtgtatactgcagttc
ctcagacttcctatagaagatccatacctagatgaggattatggacatttaggtccacta
gcctaccagcctcttccgttctcgcaggcaggtaacccagtcatgtctacagtagcgttc
ctagcctctacagtagatccacgagttgcaagtgctgctgctaaagctgctcttgaggag
ttttccaagatgaaagatgaagtgccgccagccttgattgatgcccatgtaaagatggta
gagaaagctgcaactgagggtaaagaggtggaccaggagtttggtctggatcagtctggt
attgctggtacagtgccggagaaagaggaagaagaaaagaaggaagaagggaaggagaag
aaggagggagagggggaaaataaagacgagaaagcagaatcagatataaagaaagaagcc
atggaaactgaccaggctgagaaaaagacagaagaacaaacacaggaggcaaaagatggg
gagaaaattgaggaaaagaaagaacaggatgaggctaccaaggaaggagagaaatcagca
gaagatgaggagaagaaagaggagacaagcaagggtaaagagattgtcaagagaatggat
gataaagagaagggtaacgttgccacggcagcagcagcagcactctctgcagcagctgta
aaagctaagcaccttgcagcagtagaggagcgtaagatcaagagtctagtggcattactt
gtggaaacacagatgaagaagttagagataaaacttcgacattttgatgagcttgaggcc
atcatggatagagaaagggaggcattggagtaccagcgacagcagttgttacaggaacgc
caacaattccacatggagcaggttcgagcagcggaataccgtgcccgacagattgccatg
cagcagatggcacaagaacaaaaacagacaccacaaggggccgcagatggatcaatttca
ggtcaggctcctgcttccactcagccttctgctgttggacatacctaccctacatctagt
tcacctatgaccccaatgggaccgacagcccagcagggatctccagcccctcccccagcc
acacaacccctcccaccatcaaaccaggcacagacaggtcctcctaaaccagcaactcct
gtaccaggtggtgaaggaggcgactcaaatgcctcgtcagagccaatggacacacaacct
ccgccatcatcagcagtttcagcaacgtag
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integrated database retrieval system
