Mercenaria mercenaria (northern quahog): 128548568
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Entry
128548568 CDS
T07835
Name
(RefSeq) cleavage stimulation factor subunit 1-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128548568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
128548568
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128548568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CSTF1_dimer
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
WDR54
RMC1_N
Toxin_10
Motif
Other DBs
NCBI-GeneID:
128548568
NCBI-ProteinID:
XP_053379796
LinkDB
All DBs
Position
14:complement(69065447..69100880)
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AA seq
426 aa
AA seq
DB search
MEVKQRDLLYRLMISQLFYDGHQQLAVNLASMVKAHPACPPSDRLLKVLKLGLKAEEDET
GEKTFKSEYITPGAGIDLEFETDVQTISPEAALYETCYVTAHKSACRVGVFHPSGQLIAT
GSDDTSIKILDVERMLAKSATPPEVIAQETPQQAMENHPVIRTLYDHNGEITTLDFHPHH
QILASGSKDFSVRFFEYSKPSVKKAYKSIQEAAEVRTLSFHPGGDFILVGTNHPTIRLYD
VNTFQCFVGRNPNDQHQAAVTCAKYSPNANLYTTCAKDGHIKIWDAVSGLCINTFKNAHD
GEEVCSVQFTRNSKYVLSSGKDSLVKLWELSTNRCLIVYTGAGTMGKQEHRTKACFNHTE
DYVLFPDEKTTSLCCWDSRNAERQRLLSLGHNGIVRCINHSPTGPAFVTCSDDNRARFWY
RKADSD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaaacaaagagatctgttatataggcttatgataagtcagttgttctatgat
gggcatcaacagttagcagtgaacctggcctccatggtgaaggcccatccagcatgcccg
ccatcagatagacttctcaaggtgctcaaacttggactgaaagcagaagaagatgagaca
ggggaaaagacattcaaaagtgaatacatcacccctggggcaggaatagatctggagttt
gaaactgatgttcagacaatatctccggaagcagctctttatgaaacatgctatgtgaca
gcccacaaaagcgcatgcagagtgggtgtcttccatccaagtggtcagttaattgccaca
ggatcagatgatacctcaattaagatcttggatgtggagagaatgttagccaaaagtgcc
acaccccctgaagtgattgcgcaagagactccgcaacaagccatggaaaatcatcctgtc
attagaacattatatgatcacaatggggaaataactacactagactttcatcctcatcac
cagattctggcatctggcagcaaagattttagtgtcagattcttcgaatattcaaaacct
tcagtgaaaaaagcatataaaagtatacaggaggcagcagaagtaaggacgttatcattt
catcctggtggagacttcattcttgttggcactaatcatcctacaattcggctttatgat
gtgaacacatttcagtgttttgttggaaggaatccgaatgatcaacatcaagctgcagtc
acatgtgcaaaatacagtcctaatgccaacctgtacacaacatgtgctaaggatggtcac
atcaagatctgggatgctgtgtctggtctctgtattaatacattcaagaatgctcatgat
ggggaagaagtgtgttcagtacagtttacacgaaattctaagtatgttttatcaagtggg
aaagactcgcttgtgaagttatgggaattgtcaaccaacagatgtttgattgtttatact
ggagcagggaccatggggaagcaggaacacagaactaaagcctgtttcaaccatacagag
gattatgttttgtttcctgatgagaaaactacaagtctgtgttgctgggattcaagaaac
gctgagcggcaaagacttctttctcttggtcacaatggaatagttcggtgcatcaatcac
tcgcctacaggacctgcatttgttacatgcagtgatgacaatcgtgcccgcttctggtac
agaaaggccgactcagactga
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