Methanothermobacter marburgensis: MTBMA_c01660
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Entry
MTBMA_c01660 CDS
T01297
Symbol
lig
Name
(GenBank) ATP-dependent DNA ligase
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
mmg
Methanothermobacter marburgensis
Pathway
mmg03030
DNA replication
mmg03410
Base excision repair
mmg03420
Nucleotide excision repair
mmg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTBMA_c01660 (lig)
03410 Base excision repair
MTBMA_c01660 (lig)
03420 Nucleotide excision repair
MTBMA_c01660 (lig)
03430 Mismatch repair
MTBMA_c01660 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmg03032
]
MTBMA_c01660 (lig)
03400 DNA repair and recombination proteins [BR:
mmg03400
]
MTBMA_c01660 (lig)
Enzymes [BR:
mmg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MTBMA_c01660 (lig)
6.5.1.6 DNA ligase (ATP or NAD+)
MTBMA_c01660 (lig)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
MTBMA_c01660 (lig)
DNA replication proteins [BR:
mmg03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MTBMA_c01660 (lig)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
MTBMA_c01660 (lig)
DNA repair and recombination proteins [BR:
mmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MTBMA_c01660 (lig)
NER (nucleotide excision repair)
Other NER factors
MTBMA_c01660 (lig)
MMR (mismatch excision repair)
Other MMR factors
MTBMA_c01660 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DUF502
Motif
Other DBs
NCBI-ProteinID:
ADL57775
UniProt:
D9PU77
LinkDB
All DBs
Position
171439..173094
Genome browser
AA seq
551 aa
AA seq
DB search
MLYIELAEVYRKLESTTKRLEKTDILAELFSSVERDLLPVVTLLMLGRVFPIWSEEELGV
GIKLLMRAISTVVGVSVDEIEDAMREEGDIGLASEKLFSKKTQTTFFSQPLTVEFVYDKL
RSLAFVTGERAQSRKIGILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAISRASG
ADPALVERAHMLTNDLGMVAAVAMEEGNPGLEKLNLEPGRPVKPMLAQLAESIESAIEDL
GRAFCETKYDGIRVQIHRKGDEISIFTRRLENITAAVPDILEGVERALPDEDYIVEGEII
VTIEGRPASFQYILQRVRRKYDIERLRRKVPLSLFLFDVLYYERPLIDEPLRERRRVLES
IISEIPGEIEASRMVDVGPDNVDEALWLFRESIREGHEGIMIKDTESPYIPGIRGKKMLK
FKAEPETLDLIVVGGTYGRGKRAHLIGSYLLAARDDDTGELVTVAHVATGLDDETLQELS
ERMENLAIERKGRKLSVRPEIILEVAYSEIVRSPEYESGYSLRFPVVKRIRDDLSPEDID
TVSRIESMFRA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgctctatattgaacttgcagaggtctacagaaaactggaatcaacaacaaagcgcctc
gaaaagacagatatccttgcagagctcttcagcagcgttgaaagggaccttttacctgtg
gtgaccctcctcatgcttggaagggtttttccaatctggagtgaggaggaactaggggtt
ggtataaaacttctcatgagggcgatatcaactgtcgtgggcgtttcggttgatgaaata
gaagatgcaatgagggaggagggagatatcgggcttgcgagcgagaaactcttctcaaag
aaaacccaaactaccttcttttcgcaaccactcacggttgaatttgtttatgataaactg
cgctcactggcatttgtaacaggtgaaagggcccagtcaaggaagataggtatacttgtt
gaggtcctatcccaggcaaagccacttgaggcacgttacatcaccaggacggtccttgaa
gaactccgggtgggggttgcagagggaattataagggatgccatctccagggcctcagga
gccgaccctgcgcttgttgagagggcccacatgctcaccaatgacctgggtatggtggct
gccgttgcaatggaggagggtaatccgggccttgaaaagctgaaccttgaacctggaagg
cctgtaaagccaatgcttgcacagcttgctgagagcatagaatctgcgatagaggatctt
ggaagggcattctgtgagacaaagtatgatggtataagggtccagatacaccgaaaaggg
gacgagatatctattttcacacggagacttgaaaacataaccgcggcggtccctgacatc
cttgagggcgttgaaagggcgctcccggatgaagactacatagttgagggtgagatcatc
gttacaattgagggcagacccgcttccttccagtacatactccagagggtcaggagaaag
tatgatatagaacgattgaggaggaaggttcccctttccctcttcctctttgacgtcctc
tattatgaaagaccccttatcgacgaaccacttagggagaggaggagggttcttgagtca
atcatctctgagattccaggggagattgaggcgagccggatggttgatgtgggccctgat
aacgttgatgaagccctgtggctcttcagggaatcaataagggagggtcatgagggtata
atgataaaggacacagagtcaccatatataccgggtataaggggtaaaaagatgcttaaa
ttcaaggccgaacccgaaacactggacctcattgtggttggtggcacctatggccgcgga
aaaagggcccaccttattggttcataccttctggctgcaagggatgatgatacaggggag
cttgtgacggtggctcatgttgcaacgggactggatgatgaaaccctccaggaactctca
gagaggatggagaaccttgccattgagcggaagggcaggaaactgagtgtcaggcctgag
ataatacttgaggtggcctacagtgaaatagtccggagccctgagtatgagagcggctac
tcccttcgttttcctgttgtaaaacgcataagggacgatctaagccctgaggacattgat
acggtttcccgtatagagtcaatgttcagggcttga
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