KEGG   Methanohalophilus mahii: Mmah_0567Help
Entry
Mmah_0567         CDS       T01211                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mmh  Methanohalophilus mahii
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmh00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Mmah_0567
   03410 Base excision repair
    Mmah_0567
   03420 Nucleotide excision repair
    Mmah_0567
   03430 Mismatch repair
    Mmah_0567
Enzymes [BR:mmh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mmah_0567
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mmah_0567
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mmah_0567
DNA replication proteins [BR:mmh03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Mmah_0567
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Mmah_0567
DNA repair and recombination proteins [BR:mmh03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mmah_0567
   NER (nucleotide excision repair)
    Other NER factors
     Mmah_0567
   MMR (mismatch exicision repair)
    Other MMR factors
     Mmah_0567
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(591719..593404)
Genome map
AA seq 561 aa AA seqDB search
MTSFEYFANTCASIEHIPGSLEMTDVIAKLLKEVTIEELPIVTHFVMGSVFPAWSDRQMG
VGNRLLYTALSKSSGVSEEEIENIIRKTGDIGETAVQALSSNPAGQSTFSAFIEEKPGME
IKEVYERFTHIADTAGKRSHGTKIKNLQYLFNSATPIEARYLARLAIEQLRIGVGEGIVR
DAISKAFETDVDVVERALMLTNDLGLVAVAACNGGNEEVQKLDIQLNRPVKMMLAQVTSS
IQSALNDLGEVAVEWKFDGARVQIHKEGENIHIFSRRLENVTSSLPDVVKEVQENVNADT
AILEGEAVAIGKDGKPRAFQDILKRFRRKYDVEAIAKAIPLKLNLFDVLYLNGESLIDNP
LRKRRELLFQNVQSSDRILVDRQVITDNEEEIQEIYADALRAGHEGIMIKKPDAPYSPGK
RGKNWLKKKPLMETLDLVVIGAEWGYGRRANLIGSYALGCYDPDTGKFPAIGKVATGITD
EKLAELTTLFSDLVVYEAGRKIELKPEIVFEIAFEEIQKSPNYESGYALRFPRLVNVRDD
KSPEEAESLERIGEIYHSQRS
NT seq 1686 nt NT seq  +upstreamnt  +downstreamnt
gtgacttcttttgaatattttgcaaatacatgtgcgagcatcgaacatatccccggttca
ctggaaatgaccgatgtgattgcaaaactcctaaaagaggtcacaattgaagaacttcct
attgtgacccactttgtaatgggttcggttttccctgcctggagtgacaggcagatgggt
gtaggaaacaggctcctatatactgctctctcaaaatcatcaggggtttcagaggaggaa
atagaaaatatcatccgcaaaaccggggatataggggaaacagcagtacaagccctatcc
tccaatcctgccggacaatctacattctcagcatttattgaagaaaaacccggcatggag
atcaaagaagtctatgagaggtttacccatattgcagatactgcaggtaaacgttcccac
ggtaccaaaataaaaaatctacagtatcttttcaattcggcaacacctatagaggcacga
tacctcgcccggcttgctatcgaacagctgcgtatcggagtgggagaaggaatcgtccga
gacgcgatctccaaagcttttgaaactgatgtggacgtagtcgagcgggcactcatgctg
acaaacgacctggggcttgtagccgttgcagcctgcaatggtggcaatgaagaagtacag
aaacttgacatccagctgaatcgccctgtcaaaatgatgcttgcacaggtaacatccagt
atccagtcagcccttaatgacctaggagaagttgccgtagaatggaaatttgacggggca
agagtgcagatacataaagaaggagagaacatacacatattttcccgcagacttgagaat
gtaacatcctccctgcccgatgtagtaaaagaagtgcaggaaaatgtgaatgcagacacg
gctattctagaaggagaagccgtggcgatcggaaaagatggcaaaccccgggcattccag
gacatacttaagcggttcagaagaaaatatgatgttgaagcaattgccaaagcaatccct
ctcaaactaaacctctttgacgtgctctatcttaacggggaaagtctgattgacaatcct
ctcaggaaaagaagagagttgttgttccagaatgtccagagcagtgacaggatactcgta
gacagacaagtaatcaccgataatgaggaagagatacaggaaatctatgcagatgctctc
agggcaggccatgaaggaataatgattaaaaagcccgatgcaccttattcccctggtaaa
agaggcaaaaactggcttaagaagaaaccactcatggaaaccctggatcttgtggttatc
ggtgctgagtggggatatggacgtcgtgcaaacctgattggttcctatgcccttggttgt
tatgacccggacaccggaaaattccctgccattggcaaggtagccaccggcattacagat
gaaaaactggcagaacttaccacacttttttctgatcttgttgtctatgaagcgggcaga
aaaatagaattaaaaccggaaattgtctttgagattgcttttgaagagatacaaaagagt
cccaattatgaatccggatatgccctgcgttttcccaggcttgttaatgtgagggatgat
aaatcccctgaagaagcagagagcctggaaaggataggggagatatatcactcccagaga
tcctga

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