Mycobacterium sp. MOTT36Y: W7S_04630
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Entry
W7S_04630 CDS
T02113
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmm
Mycobacterium sp. MOTT36Y
Pathway
mmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
W7S_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmm03400
]
W7S_04630
Enzymes [BR:
mmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
W7S_04630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
W7S_04630
DNA repair and recombination proteins [BR:
mmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
W7S_04630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AFJ33909
UniProt:
I2A9D5
LinkDB
All DBs
Position
924199..925062
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AA seq
287 aa
AA seq
DB search
MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPPINALHGQTVVGADRWGKYLG
LRTDDLYLVAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVSDPQQIPQIASLGPDALDLGPDDLARILAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSEKQLAALHDAMITVLTDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgagatcgaagcgctggccgatcatctacggcgcaacgccgtgggc
ctgacggtcggccgtgtcgacatcgccgccctgtccgtcctgaagaccttcgacccgccg
atcaacgcgctgcacggccagaccgtggtcggcgccgaccgctggggcaaatacctgggg
ctgcggacggacgacctctacctggtcgcccacttgtcccgggcgggctggttgcggtgg
tccgacaagctggccgcggcgccgctgcgccccggcaagggcccgatcgcgctgcgcgtg
cacctgggcacgcccggtgaggcgcccggcttcgacctcaccgaggccggcacccagaag
cggctggcggtgtggctggtaagcgacccgcagcagatcccacagatcgcctccctcggg
ccggacgcgctggacctcggccccgacgacctggcccgcattctggcgggcaacaccggg
cggatcaagaccgtcatcaccgaccagaaggtgatcgccggtatcggcaacgcctacagc
gacgagatcttgcacgtcgcgaagatctcgccgttcgccaccgccggcaagctgtccgag
aagcagctcgccgcgctgcacgacgccatgatcaccgtgctcaccgacgcggtgagccga
tccgtcggccagggcgcggccacgctcaagggcgagaagcgctccggattgcgcgtgcac
gcccgcacgggcctgccctgcccggtgtgcggggacaccgtgcgtgaagtgtcgttcgcg
gacaagtcttttcaatattgtccgacgtgtcagaccggaggcaaggtcctggccgaccgg
cggatgtcgcgtttgctgaagtag
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